C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091703 Hist1h3b-001 ENSMUSG00000069267 10090 + 13:23752267-23752886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000091703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000091703 1.543±0.91 0.273±0.15 0.106±0.00 12.087±1.90 0.774±0.40 2.446±0.56 0.132±0.07 0.175±0.13 8.788±11.39 0.391±0.03 3.589±1.61 6.692±4.42 0.622±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005654 ISS nucleoplasm
GO:0046982 IEA protein heterodimerization activity
GO:0060968 ISS regulation of gene silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 460
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 455
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 449
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 449
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 444
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 444
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 438
ENSDART00000089844 protein_coding Danio_rerio 0 436
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 427
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 427
ENSDART00000136456 protein_coding Danio_rerio 0 427
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 427
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 420
ENSDART00000151600 protein_coding Danio_rerio 0 355
ENSDART00000093030 protein_coding Danio_rerio 0 344
ENSDART00000103006 protein_coding Danio_rerio 0.00004 53
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 510
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 486
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 501
ENST00000436555 HIST3H2BA-001 unitary_pseudogene Homo_sapiens 0.00003 53
ENST00000613854 HIST1H3A-001 protein_coding Homo_sapiens 0 464
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 475
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 455
ENST00000620438 HIST3H2BB-001 protein_coding Homo_sapiens 0.0000009 60

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