C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614079 ARHGAP35-201 ENSG00000160007 9606 + 19:46918676-47004307 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartLiverLungMuscleOvaryPlacentaTestisENST00000614079
Transcript ID Adipose Bladder Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000614079 1.712±0.00 2.340±0.00 5.843±0.00 3.693±0.00 2.122±0.52 2.252±0.00 1.323±0.00 1.544±0.23 10.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005100 TAS Rho GTPase activator activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IC nucleus
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0007411 TAS axon guidance
GO:0032321 TAS positive regulation of Rho GTPase activity
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171937 Arhgap35-201 protein_coding Mus_musculus 0 5781
ENSMUST00000075845 Arhgap35-001 protein_coding Mus_musculus 0 5781

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