C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615468 TNFAIP3-204 ENSG00000118503 9606 + 6:137871211-137882748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000615468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000615468 6.014±0.00 4.329±0.00 0.424±0.00 0.261±0.16 1.904±0.00 2.481±0.55 0.910±0.00 0.561±0.00 1.436±0.77 13.250±11.09 1.842±0.00 2.836±0.85 1.284±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JD CIL_0008JD_0001 VISTA 6:137510749-138112161

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105527 Tnfaip3-002 protein_coding Mus_musculus 0 2237
ENSMUST00000019997 Tnfaip3-001 protein_coding Mus_musculus 0 2237
ENSMUST00000154590 Tnfaip3-003 retained_intron Mus_musculus 0 966
ENSMUST00000122863 Tnfaip3-004 protein_coding Mus_musculus 0 444
ENSMUST00000146388 Tnfaip3-005 protein_coding Mus_musculus 0 344

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