C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008JD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1832 VISTA 9606 6:137510749-138112161
GeneTranscriptPositionBiotype
ENSG00000112378 (PERP)
PERP, TP53 apoptosis effector 		ENST00000421351 (PERP-001) 138088505-138107511 protein_coding
ENSG00000118503 (TNFAIP3)
tumor necrosis factor, alpha-induced protein 3 		ENST00000237289 (TNFAIP3-001) 137867444-137883312 protein_coding
ENST00000420009 (TNFAIP3-003) 137867322-137875035 protein_coding
ENST00000421450 (TNFAIP3-002) 137867214-137871304 protein_coding
ENST00000433680 (TNFAIP3-004) 137867582-137871522 protein_coding
ENST00000485192 (TNFAIP3-005) 137875838-137878525 processed_transcript
ENST00000612899 (TNFAIP3-201) 137867188-137883311 protein_coding
ENST00000614035 (TNFAIP3-202) 137871228-137878860 protein_coding
ENST00000614451 (TNFAIP3-203) 137867236-137881319 protein_coding
ENST00000615468 (TNFAIP3-204) 137871211-137882748 protein_coding
ENST00000619035 (TNFAIP3-205) 137871211-137882748 protein_coding
ENST00000620204 (TNFAIP3-206) 137871211-137882748 protein_coding
ENST00000621150 (TNFAIP3-207) 137871228-137879043 protein_coding
ENSG00000220412 (RP11-95M15.2)
 ENST00000404534 (RP11-95M15.2-001) 137705423-137707201 processed_pseudogene
ENSG00000226004 (RP11-10J5.1)
 ENST00000417932 (RP11-10J5.1-001) 137943079-137945802 lincRNA
ENSG00000229922 (RP11-240M16.1)
 ENST00000417800 (RP11-240M16.1-001) 137945366-137972522 lincRNA
ENST00000434437 (RP11-240M16.1-002) 137945366-137951574 lincRNA
ENSG00000230533 (RP11-95M15.1)
 ENST00000440397 (RP11-95M15.1-001) 137673460-137674554 lincRNA
CIL_0008JD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1832 VISTA 10090 10:18777703-19380447
GeneTranscriptPositionBiotype
ENSMUSG00000019850 (Tnfaip3)
tumor necrosis factor, alpha-induced protein 3 		ENSMUST00000019997 (Tnfaip3-001) 19000910-19015410 protein_coding
ENSMUST00000105527 (Tnfaip3-002) 19000913-19011963 protein_coding
ENSMUST00000122863 (Tnfaip3-004) 19008266-19015657 protein_coding
ENSMUST00000146388 (Tnfaip3-005) 19011516-19014582 protein_coding
ENSMUST00000154590 (Tnfaip3-003) 19000929-19015376 retained_intron
ENSMUST00000154749 (Tnfaip3-006) 19007267-19008845 retained_intron
ENSMUSG00000019851 (Perp)
PERP, TP53 apoptosis effector 		ENSMUST00000019998 (Perp-201) 18845071-18857073 protein_coding
ENSMUSG00000044624 (Gm4922)
predicted gene 4922 		ENSMUST00000055107 (Gm4922-201) 18779813-18785011 protein_coding
ENSMUSG00000045591 (Olig3)
oligodendrocyte transcription factor 3 		ENSMUST00000053225 (Olig3-201) 19356560-19358606 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JD_0001ENSG00000112378ENST00000421351ENSG00000118503ENST00000237289ENST00000420009ENST00000421450ENST00000433680ENST00000485192ENST00000612899ENST00000614035ENST00000614451ENST00000615468ENST00000619035ENST00000620204ENST00000621150ENSG00000220412ENST00000404534ENSG00000226004ENST00000417932ENSG00000229922ENST00000417800ENST00000434437ENSG00000230533ENST00000440397CIL_0008JD_0002ENSMUSG00000019850ENSMUST00000019997ENSMUST00000105527ENSMUST00000122863ENSMUST00000146388ENSMUST00000154590ENSMUST00000154749ENSMUSG00000019851ENSMUST00000019998ENSMUSG00000044624ENSMUST00000055107ENSMUSG00000045591ENSMUST00000053225
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JD_0001ENSG00000112378ENST00000421351ENSG00000118503ENST00000237289ENST00000420009ENST00000433680ENST00000485192ENST00000612899ENST00000614035ENST00000614451ENST00000615468ENSG00000220412ENST00000404534ENSG00000226004ENST00000417932ENSG00000229922ENST00000417800ENST00000434437ENSG00000230533ENST00000440397CIL_0008JD_0002ENSMUSG00000019850ENSMUST00000019997ENSMUST00000105527ENSMUST00000154590ENSMUSG00000019851ENSMUST00000019998ENSMUSG00000044624ENSMUST00000055107ENSMUSG00000045591ENSMUST00000053225
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112378 ENST00000421351 13.488±0.00 3.248±0.00 1.218±0.00 0.993±0.60 12.703±7.16 13.694±7.22 9.923±6.07 7.398±1.53 13.421±8.22 10.116±6.17 0.882±0.69 125.370±124.76 36.023±7.28 3.692±2.05
ENSG00000118503 ENST00000237289 7.164±0.00 6.633±0.00 N/A N/A 0.901±0.00 1.802±0.00 0.496±0.00 0.977±0.30 0.689±0.00 5.730±0.00 1.724±0.00 21.225±10.57 7.667±3.46 3.939±0.15
ENST00000420009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.926±0.00
ENST00000421450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.258±0.00 N/A
ENST00000485192 N/A N/A N/A 1.442±0.00 N/A N/A N/A N/A N/A N/A 0.987±0.00 N/A N/A N/A
ENST00000612899 4.432±0.00 N/A N/A 0.308±0.00 1.940±0.00 1.912±0.00 0.397±0.00 1.101±0.00 1.948±0.00 7.406±5.60 N/A 4.720±0.00 2.371±0.23 2.299±0.86
ENST00000614035 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.202±0.00 N/A N/A N/A N/A
ENST00000614451 N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A 2.100±0.00 N/A N/A N/A N/A N/A
ENST00000615468 6.014±0.00 4.329±0.00 0.424±0.00 0.261±0.16 1.904±0.00 2.481±0.55 0.910±0.00 0.561±0.00 1.436±0.77 13.250±11.09 1.842±0.00 N/A 2.836±0.85 1.284±0.00
ENST00000619035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000220412 ENST00000404534 N/A 0.065±0.00 N/A 0.015±0.00 0.030±0.02 0.007±0.00 0.011±0.00 N/A N/A 0.109±0.00 N/A 0.028±0.01 0.025±0.02 0.085±0.07
ENSG00000226004 ENST00000417932 N/A 0.127±0.00 N/A 0.021±0.00 N/A N/A 0.040±0.00 N/A N/A N/A N/A 0.034±0.00 0.073±0.00 0.136±0.08
ENSG00000229922 ENST00000417800 N/A 0.109±0.00 N/A 0.310±0.00 0.145±0.00 N/A N/A 0.247±0.00 N/A 0.092±0.00 N/A N/A N/A N/A
ENST00000434437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00
ENSG00000230533 ENST00000440397 N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.284±0.00 N/A 1.557±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019850 ENSMUST00000019997 1.709±0.28 1.061±0.15 1.424±0.01 0.863±0.15 4.913±2.09 6.968±1.70 0.603±0.12 0.995±0.23 0.468±0.35 3.858±0.25 0.979±0.30 0.928±0.35 0.981±0.34 0.481±0.23
ENSMUST00000105527 N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A 0.079±0.03 N/A 0.349±0.00 0.257±0.00 0.501±0.06 0.407±0.00
ENSMUST00000122863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154590 0.180±0.05 0.170±0.06 N/A N/A N/A 0.859±0.13 0.068±0.00 0.127±0.00 0.089±0.01 0.383±0.00 N/A 0.173±0.06 N/A N/A
ENSMUST00000154749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019851 ENSMUST00000019998 7.332±6.55 6.164±1.43 119.024±10.46 4.495±2.87 36.913±4.96 239.753±42.49 68.883±12.19 41.082±8.68 54.579±44.49 69.977±39.22 1.307±0.79 37.488±22.60 32.135±14.81 1.474±1.07
ENSMUSG00000044624 ENSMUST00000055107 N/A N/A 0.007±0.00 0.017±0.01 N/A 0.071±0.02 0.026±0.01 0.029±0.01 0.006±0.00 0.037±0.00 N/A N/A 0.005±0.00 3.519±1.02
ENSMUSG00000045591 ENSMUST00000053225 0.092±0.04 N/A N/A 1.179±0.86 0.042±0.01 N/A 0.040±0.00 N/A N/A 0.215±0.10 N/A 0.521±0.20 0.003±0.00 0.054±0.02

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