C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154590 Tnfaip3-003 ENSMUSG00000019850 10090 - 10:19000929-19015376 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungOvaryENSMUST00000154590
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Ovary
ENSMUST00000154590 0.180±0.05 0.170±0.06 0.859±0.13 0.068±0.00 0.127±0.00 0.089±0.01 0.383±0.00 0.173±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JD CIL_0008JD_0002 VISTA 10:18777703-19380447
CIL_000081 CIL_000081_0002 CGP 10:18845071-19015657

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237289 TNFAIP3-001 protein_coding Homo_sapiens 0 985
ENST00000420009 TNFAIP3-003 protein_coding Homo_sapiens 0 580
ENST00000421450 TNFAIP3-002 protein_coding Homo_sapiens 5e-27 124
ENST00000433680 TNFAIP3-004 protein_coding Homo_sapiens 0 377
ENST00000485192 TNFAIP3-005 processed_transcript Homo_sapiens 0 333
ENST00000612899 TNFAIP3-201 protein_coding Homo_sapiens 0 976
ENST00000614035 TNFAIP3-202 protein_coding Homo_sapiens 0 972
ENST00000614451 TNFAIP3-203 protein_coding Homo_sapiens 0 977
ENST00000615468 TNFAIP3-204 protein_coding Homo_sapiens 0 966
ENST00000619035 TNFAIP3-205 protein_coding Homo_sapiens 0 974
ENST00000620204 TNFAIP3-206 protein_coding Homo_sapiens 0 974
ENST00000621150 TNFAIP3-207 protein_coding Homo_sapiens 0 972

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