C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616098 APOB-201 ENSG00000084674 9606 - 2:21001429-21043945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000616098
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000616098 3.143±0.00 0.037±0.00 0.064±0.04 0.471±0.00 0.136±0.02 1.305±0.83 0.029±0.00 249.261±0.00 0.003±0.00 0.190±0.05 0.100±0.04 0.003±0.00 0.079±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005319 IEA lipid transporter activity
GO:0005488 IEA binding
GO:0006869 IEA lipid transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037811 Apob-001 protein_coding Mus_musculus 0 8357
ENSMUST00000037520 Apob-004 protein_coding Mus_musculus 0 5184
ENSMUST00000171271 Apob-002 protein_coding Mus_musculus 0 819
ENSMUST00000171239 Apob-005 protein_coding Mus_musculus 0 374

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