C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein, 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616321 CORO1B-009 ENSG00000172725 9606 - 11:67435510-67443484 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyMuscleOvaryENST00000616321
Transcript ID Brain Breast Kidney Muscle Ovary
ENST00000616321 0.610±0.00 0.757±0.00 2.360±0.00 0.113±0.00 0.524±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181494 CORO1B-001 protein_coding Mus_musculus 0 970
ENSMUST00000008893 Coro1b-001 protein_coding Mus_musculus 0 970
ENSMUST00000180620 CORO1B-002 protein_coding Mus_musculus 0 723
ENSMUST00000123874 Coro1b-002 protein_coding Mus_musculus 0 723
ENSMUST00000180605 CORO1B-005 processed_transcript Mus_musculus 0 691
ENSMUST00000134194 Coro1b-005 processed_transcript Mus_musculus 0 691
ENSMUST00000181608 CORO1B-008 retained_intron Mus_musculus 0 593
ENSMUST00000135498 Coro1b-008 retained_intron Mus_musculus 0 593
ENSMUST00000181861 CORO1B-006 retained_intron Mus_musculus 0 588
ENSMUST00000143613 Coro1b-006 retained_intron Mus_musculus 0 588
ENSMUST00000181219 CORO1B-009 retained_intron Mus_musculus 0 468
ENSMUST00000148189 Coro1b-009 retained_intron Mus_musculus 0 468
ENSDART00000004217 coro1ca-001 protein_coding Danio_rerio 0 412
ENSMUST00000180560 CORO1B-007 retained_intron Mus_musculus 0 388
ENSMUST00000140419 Coro1b-007 retained_intron Mus_musculus 0 388
ENSDART00000045880 coro6-201 protein_coding Danio_rerio 0 217
ENSDART00000131005 coro6-202 protein_coding Danio_rerio 0 217
ENSMUST00000142878 Coro1b-003 retained_intron Mus_musculus 0 283
ENSMUST00000148733 Coro1b-004 retained_intron Mus_musculus 0 337
ENSMUST00000180891 CORO1B-003 retained_intron Mus_musculus 0 283
ENSMUST00000181909 CORO1B-004 retained_intron Mus_musculus 0 337

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