C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616467 PPP2R2D-002 ENSG00000175470 9606 + 10:131901031-131956555 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000616467
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000616467 1.401±0.00 1.466±0.00 4.559±0.00 1.583±0.29 2.620±1.40 3.183±0.00 1.774±0.39 1.144±0.00 0.929±0.00 2.265±0.00 2.607±0.16 3.640±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 ISS protein phosphatase type 2A complex
GO:0000278 TAS mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007067 ISS mitotic nuclear division
GO:0007165 IEA signal transduction
GO:0008601 ISS protein phosphatase type 2A regulator activity
GO:0010458 ISS exit from mitosis
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 950
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 950
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 787
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 412
ENSDART00000028983 PPP2R2A (2 of 2)-201 protein_coding Danio_rerio 0 344
ENSDART00000155816 PPP2R2A (2 of 2)-001 protein_coding Danio_rerio 0 344
ENSMUST00000128157 Ppp2r2d-002 retained_intron Mus_musculus 0 298
ENSMUST00000136824 Ppp2r2d-007 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000152104 Ppp2r2d-005 processed_transcript Mus_musculus 0 196
ENSMUST00000140047 Ppp2r2d-006 processed_transcript Mus_musculus 2e-37 161
ENSMUST00000148453 Ppp2r2d-004 nonsense_mediated_decay Mus_musculus 3e-36 158

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