C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Hepatoma-derived growth factor-related protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616600 HDGFRP2-001 ENSG00000167674 9606 + 19:4472287-4502211 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000616600
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000616600 11.302±0.00 1.616±0.00 8.587±6.01 23.026±0.00 6.412±0.00 5.389±0.00 6.082±4.71 19.892±16.70 16.270±4.20 29.195±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z9 CIL_0002Z9_0001 CGP 19:4444999-4502211
CIL_0002YS CIL_0002YS_0001 CGP 19:4472287-4517704

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002911 Hdgfrp2-201 protein_coding Mus_musculus 0 1430

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