C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Z9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167671-ENSG00000167674 CGP 9606 19:4444999-4502211
GeneTranscriptPositionBiotype
ENSG00000167670 (CHAF1A)
chromatin assembly factor 1, subunit A (p150) 		ENST00000301280 (CHAF1A-001) 4402662-4443392 protein_coding
ENST00000585371 (CHAF1A-007) 4418029-4429516 nonsense_mediated_decay
ENST00000585854 (CHAF1A-004) 4402717-4409303 protein_coding
ENST00000587368 (CHAF1A-009) 4431055-4433317 processed_transcript
ENST00000587580 (CHAF1A-006) 4402702-4409207 processed_transcript
ENST00000587739 (CHAF1A-005) 4409445-4428863 protein_coding
ENST00000589648 (CHAF1A-008) 4442254-4445018 protein_coding
ENSG00000167671 (UBXN6)
UBX domain protein 6 		ENST00000301281 (UBXN6-002) 4445006-4457822 protein_coding
ENST00000394765 (UBXN6-001) 4445010-4455298 protein_coding
ENST00000587009 (UBXN6-004) 4445010-4448116 retained_intron
ENST00000587324 (UBXN6-009) 4445476-4446698 retained_intron
ENST00000588238 (UBXN6-005) 4445007-4449604 retained_intron
ENST00000590466 (UBXN6-006) 4445091-4446620 protein_coding
ENST00000591919 (UBXN6-003) 4444999-4454093 protein_coding
ENST00000592358 (UBXN6-007) 4447839-4452412 retained_intron
ENST00000592515 (UBXN6-010) 4448396-4455438 protein_coding
ENST00000593024 (UBXN6-008) 4447550-4448870 retained_intron
ENSG00000167674 (HDGFRP2)
Hepatoma-derived growth factor-related protein 2 		ENST00000587016 (HDGFRP2-007) 4496333-4502104 protein_coding
ENST00000589486 (HDGFRP2-010) 4474892-4493762 protein_coding
ENST00000592417 (HDGFRP2-005) 4498362-4502208 protein_coding
ENST00000592691 (HDGFRP2-009) 4474912-4488836 protein_coding
ENST00000601353 (HDGFRP2-011) 4472308-4491682 nonsense_mediated_decay
ENST00000614903 (HDGFRP2-004) 4499589-4502033 protein_coding
ENST00000615225 (HDGFRP2-003) 4475349-4502201 nonsense_mediated_decay
ENST00000616600 (HDGFRP2-001) 4472287-4502211 protein_coding
ENST00000619255 (HDGFRP2-008) 4499629-4501578 protein_coding
ENST00000621835 (HDGFRP2-002) 4472306-4502207 protein_coding
ENSG00000167676 (PLIN4)
perilipin 4 		ENST00000301286 (PLIN4-001) 4502192-4517704 protein_coding
ENSG00000267011 (CTB-50L17.16)
 ENST00000589066 (CTB-50L17.16-002) 4470501-4471493 lincRNA
ENST00000590989 (CTB-50L17.16-003) 4457962-4471279 lincRNA
ENST00000591414 (CTB-50L17.16-001) 4457962-4458759 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002Z9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019578-ENSMUSG00000002833 CGP 10090 17:56067045-56100596
GeneTranscriptPositionBiotype
ENSMUSG00000002831 (Plin4)
perilipin 4 		ENSMUST00000002908 (Plin4-201) 56100591-56109802 protein_coding
ENSMUST00000190703 (Plin4-001) 56100591-56109803 protein_coding
ENSMUSG00000002833 (Hdgfrp2)
hepatoma-derived growth factor, related protein 2 		ENSMUST00000002911 (Hdgfrp2-201) 56079657-56100596 protein_coding
ENSMUSG00000002835 (Chaf1a)
chromatin assembly factor 1, subunit A (p150) 		ENSMUST00000002914 (Chaf1a-201) 56040416-56068026 protein_coding
ENSMUSG00000019578 (Ubxn6)
UBX domain protein 6 		ENSMUST00000019722 (Ubxn6-001) 56067045-56075028 protein_coding
ENSMUST00000132804 (Ubxn6-003) 56068250-56072232 retained_intron
ENSMUST00000134441 (Ubxn6-007) 56068536-56069434 retained_intron
ENSMUST00000139371 (Ubxn6-004) 56070644-56074547 protein_coding
ENSMUST00000146467 (Ubxn6-005) 56070118-56074848 retained_intron
ENSMUST00000151943 (Ubxn6-002) 56068250-56075017 retained_intron
ENSMUST00000153947 (Ubxn6-006) 56069638-56072440 processed_transcript

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z9_0001ENSG00000167670ENST00000301280ENST00000585371ENST00000585854ENST00000587368ENST00000587580ENST00000587739ENST00000589648ENSG00000167671ENST00000301281ENST00000394765ENST00000587009ENST00000587324ENST00000588238ENST00000590466ENST00000591919ENST00000592358ENST00000592515ENST00000593024ENSG00000167674ENST00000587016ENST00000589486ENST00000592417ENST00000592691ENST00000601353ENST00000614903ENST00000615225ENST00000616600ENST00000619255ENST00000621835ENSG00000167676ENST00000301286ENSG00000267011ENST00000589066ENST00000590989ENST00000591414CIL_0002Z9_0002ENSMUSG00000002831ENSMUST00000002908ENSMUST00000190703ENSMUSG00000002833ENSMUST00000002911ENSMUSG00000002835ENSMUST00000002914ENSMUSG00000019578ENSMUST00000019722ENSMUST00000132804ENSMUST00000134441ENSMUST00000139371ENSMUST00000146467ENSMUST00000151943ENSMUST00000153947
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z9_0001ENSG00000167670ENST00000301280ENSG00000167671ENST00000301281ENST00000394765ENST00000587324ENST00000591919ENSG00000167674ENST00000587016ENST00000592417ENST00000592691ENST00000601353ENST00000615225ENST00000616600ENST00000621835ENSG00000167676ENST00000301286ENSG00000267011ENST00000589066ENST00000590989ENST00000591414CIL_0002Z9_0002ENSMUSG00000002831ENSMUST00000002908ENSMUST00000190703ENSMUSG00000002833ENSMUST00000002911ENSMUSG00000002835ENSMUST00000002914ENSMUSG00000019578ENSMUST00000019722ENSMUST00000132804ENSMUST00000139371ENSMUST00000151943
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167670 ENST00000301280 N/A 9.611±0.00 0.505±0.00 4.770±0.00 3.195±2.23 0.670±0.00 N/A N/A 0.743±0.00 N/A 8.260±0.00 2.670±1.69 5.834±1.13 12.065±1.11
ENST00000585371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167671 ENST00000301281 69.064±0.00 55.282±0.00 2.009±0.00 30.245±13.66 26.402±21.37 22.234±20.26 24.856±0.00 27.655±19.74 18.448±9.15 24.305±20.25 34.302±25.90 48.529±33.09 36.775±7.74 98.419±0.00
ENST00000394765 N/A N/A 3.660±0.00 N/A N/A 4.630±0.00 2.896±0.00 2.270±0.00 N/A 2.038±0.00 5.998±0.00 34.981±24.15 43.244±6.45 N/A
ENST00000587009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587324 62.052±0.00 N/A N/A N/A 51.835±0.00 41.569±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591919 N/A N/A N/A 26.947±0.00 15.679±0.00 15.283±0.00 12.607±0.00 25.430±0.00 12.233±0.00 21.132±0.00 47.936±0.00 34.903±0.00 72.423±0.00 60.461±27.34
ENST00000592358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167674 ENST00000587016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.805±0.00 29.576±0.00 80.000±0.00
ENST00000589486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592417 N/A N/A N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592691 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A N/A N/A
ENST00000601353 N/A N/A 2.486±0.00 N/A N/A N/A N/A 3.651±0.00 N/A N/A N/A N/A N/A N/A
ENST00000614903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.850±0.00 N/A N/A
ENST00000616600 N/A 11.302±0.00 1.616±0.00 8.587±6.01 N/A 23.026±0.00 N/A 6.412±0.00 5.389±0.00 6.082±4.71 N/A 19.892±16.70 16.270±4.20 29.195±1.74
ENST00000619255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621835 N/A 7.666±0.00 N/A 4.926±3.50 N/A N/A N/A 9.010±0.00 5.233±0.00 3.162±0.00 N/A 11.331±11.15 7.500±2.16 17.830±2.47
ENSG00000167676 ENST00000301286 542.126±0.00 8.493±0.00 0.292±0.00 2.839±0.00 1516.260±0.00 36.771±0.00 17.720±16.60 2.117±1.37 8.052±0.00 1.079±0.00 116.253±0.00 8.743±9.01 N/A 7.754±0.00
ENSG00000267011 ENST00000589066 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 0.181±0.01 1.338±0.87
ENST00000590989 0.138±0.00 N/A N/A 0.538±0.00 N/A N/A 0.086±0.00 N/A 0.086±0.00 N/A N/A N/A 0.297±0.00 2.924±0.88
ENST00000591414 0.116±0.00 0.502±0.00 N/A N/A 0.541±0.00 N/A 0.098±0.00 0.161±0.00 N/A 0.581±0.00 N/A 0.145±0.07 0.197±0.00 2.108±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002831 ENSMUST00000002908 177.467±105.96 46.537±12.68 8.550±0.36 N/A 118.413±10.82 5.667±1.72 23.591±0.90 3.847±1.15 1.341±0.27 7.347±3.01 14.154±2.99 41.155±9.21 N/A N/A
ENSMUST00000190703 256.629±148.32 51.554±17.13 37.298±2.78 N/A 141.100±28.55 6.631±1.44 30.624±1.63 4.507±1.37 1.481±0.23 9.236±3.59 33.600±6.47 71.954±15.74 5.054±2.00 N/A
ENSMUSG00000002833 ENSMUST00000002911 N/A 51.011±7.49 21.886±0.24 47.183±21.10 N/A 6.907±1.10 N/A 11.109±1.24 13.752±2.09 12.071±6.30 10.946±0.00 59.725±27.55 40.462±29.74 60.529±15.25
ENSMUSG00000002835 ENSMUST00000002914 3.894±0.24 N/A N/A 5.377±1.10 N/A 3.939±0.43 N/A N/A 10.797±5.53 N/A N/A 8.982±1.91 13.380±11.36 71.540±37.24
ENSMUSG00000019578 ENSMUST00000019722 3.778±0.12 N/A 4.032±0.00 15.393±6.10 4.540±0.44 4.205±0.58 N/A 3.194±0.37 8.920±3.11 4.405±1.62 2.595±0.00 9.661±3.55 12.991±3.71 63.093±28.57
ENSMUST00000132804 N/A N/A 3.254±0.00 N/A 4.220±0.90 N/A N/A N/A N/A 3.064±0.00 N/A 4.568±0.16 2.295±0.00 N/A
ENSMUST00000134441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139371 N/A 30.656±6.77 N/A N/A N/A N/A N/A N/A N/A 19.453±0.00 N/A N/A 33.834±0.00 170.621±15.06
ENSMUST00000146467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151943 7.235±1.47 13.677±4.28 7.401±0.99 9.449±3.04 8.034±1.65 7.133±1.90 4.368±0.48 6.574±1.81 4.195±1.37 9.250±3.17 4.657±0.52 12.422±4.13 7.300±0.00 37.429±6.96
ENSMUST00000153947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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