C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Down syndrome cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617870 DSCAM-201 ENSG00000171587 9606 - 21:40012414-40369270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverOvaryPlacentaTestisENST00000617870
Transcript ID Adipose Adrenal Brain Colon Liver Ovary Placenta Testis
ENST00000617870 0.003±0.00 0.003±0.00 1.070±0.00 0.021±0.00 0.004±0.00 0.025±0.00 0.093±0.03 0.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CT CIL_0001CT_0002 CGP 21:39867317-40847139
CIL_0001CW CIL_0001CW_0002 CGP 21:40010999-41282518

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056102 Dscam-001 protein_coding Mus_musculus 0 7568
ENSDART00000136928 dscama-001 protein_coding Danio_rerio 0 1827
ENSDART00000098963 dscama-201 protein_coding Danio_rerio 0 1823
ENSDART00000125045 dscama-202 protein_coding Danio_rerio 0 1821

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