C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000618048  |
KCNMA1-204 |
ENSG00000156113 |
9606 | - |
10:77636205-77637819  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JX | CIL_0007JX_0001 | UCNEbase | 10:74418410-76978156 |
| CIL_0005E6 | CIL_0005E6_0001 | CGP | 10:75431453-77638595 |
| CIL_0008QZ | CIL_0008QZ_0001 | VISTA | 10:76330832-76932117 |
| CIL_0008KV | CIL_0008KV_0001 | VISTA | 10:76764029-77364632 |
| CIL_0008L3 | CIL_0008L3_0001 | VISTA | 10:76772404-77373369 |
| CIL_00087A | CIL_00087A_0001 | VISTA | 10:76800721-77402185 |
| CIL_0004CA | CIL_0004CA_0001 | CGP | 10:76869601-77926526 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000188210
|
Kcnma1-001 | protein_coding | Mus_musculus | 0 | 909 |
|
ENSMUST00000190339
|
Kcnma1-002 | protein_coding | Mus_musculus | 0 | 902 |
|
ENSMUST00000190044
|
Kcnma1-005 | protein_coding | Mus_musculus | 0 | 749 |
|
ENSMUST00000188285
|
Kcnma1-003 | protein_coding | Mus_musculus | 0 | 749 |
|
ENSMUST00000188991
|
Kcnma1-006 | protein_coding | Mus_musculus | 0 | 628 |
|
ENSMUST00000190985
|
Kcnma1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 411 |
|
ENSDART00000113062
|
BICD1 (1 of 2)-201 | protein_coding | Danio_rerio | 0.00005 | 55 |
