C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618172 DDX27-007 ENSG00000124228 9606 + 20:49219416-49244070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000618172
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000618172 16.542±0.00 23.815±0.00 10.221±0.00 16.183±0.00 11.401±7.12 6.265±0.00 20.056±0.00 4.843±1.46 4.011±0.00 8.182±6.31 32.767±7.75 19.011±1.38 19.042±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T2 CIL_0001T2_0001 CGP 20:49113339-49244077
CIL_000279 CIL_000279_0001 CGP 20:49219295-49278426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018143 Ddx27-001 protein_coding Mus_musculus 0 2789
ENSMUST00000150571 Ddx27-002 protein_coding Mus_musculus 0 987
ENSDART00000128065 ddx27-001 protein_coding Danio_rerio 0 737
ENSMUST00000176066 Ddx27-006 protein_coding Mus_musculus 0 531
ENSMUST00000138969 Ddx27-004 retained_intron Mus_musculus 0 370
ENSMUST00000126409 Ddx27-003 retained_intron Mus_musculus 0 261
ENSMUST00000127468 Ddx27-005 retained_intron Mus_musculus 6.02558e-44 183

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