C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: class II, major histocompatibility complex, transactivator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618327 CIITA-203 ENSG00000179583 9606 + 16:10877198-10924983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungOvaryPlacentaENST00000618327
Transcript ID Kidney Lung Ovary Placenta
ENST00000618327 0.652±0.00 4.701±0.00 0.768±0.00 1.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000750 CIL_000750_0001 CGP 16:10760919-10932281
CIL_000751 CIL_000751_0001 CGP 16:10877198-10942460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0006954 IEA inflammatory response
GO:0007568 IEA aging
GO:0009986 IEA cell surface
GO:0034341 IEA response to interferon-gamma
GO:0045348 IEA positive regulation of MHC class II biosynthetic process
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0071257 IEA cellular response to electrical stimulus
GO:0071346 IEA cellular response to interferon-gamma
GO:0071360 IEA cellular response to exogenous dsRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023147 Ciita-201 protein_coding Mus_musculus 0 1781

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