C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glypican 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618596 GPC5-201 ENSG00000179399 9606 + 13:91693186-91756424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungMuscleTestisENST00000618596
Transcript ID Breast Heart Liver Lung Muscle Testis
ENST00000618596 0.102±0.00 0.212±0.00 0.076±0.00 0.476±0.00 0.307±0.24 5.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EC CIL_0002EC_0001 CGP 13:91398675-94407401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016020 IEA membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022707 Gpc5-201 protein_coding Mus_musculus 0 1026
ENSMUST00000176912 Gpc5-001 protein_coding Mus_musculus 0 1026
ENSMUST00000175665 Gpc5-003 protein_coding Mus_musculus 0 933

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