C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gametogenetin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619573 GGNBP2-005 ENSG00000278311 9606 + 17:36576657-36586153 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleOvaryENST00000619573
Transcript ID Brain Colon Heart Liver Lung Muscle Ovary
ENST00000619573 1.717±0.00 2.291±0.00 0.733±0.00 2.277±0.00 3.742±0.00 0.631±0.00 7.825±2.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085R CIL_00085R_0001 VISTA 17:36355391-36956100
CIL_0007YB CIL_0007YB_0001 VISTA 17:36401446-37002205
CIL_0007YB CIL_0007YB_0003 VISTA 17:36402232-37002285
CIL_0005HP CIL_0005HP_0002 CGP 17:36535020-36589848
CIL_0005HQ CIL_0005HQ_0002 CGP 17:36544888-36600806

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018547 Ggnbp2-002 protein_coding Mus_musculus 0 1325
ENSMUST00000154915 Ggnbp2-003 protein_coding Mus_musculus 0 1325
ENSMUST00000168434 Ggnbp2-001 protein_coding Mus_musculus 0 1325
ENSMUST00000172405 Ggnbp2-201 protein_coding Mus_musculus 0 1297
ENSMUST00000108081 Ggnbp2-007 protein_coding Mus_musculus 0 1297
ENSMUST00000100686 Ggnbp2-008 protein_coding Mus_musculus 0 787
ENSMUST00000170741 Ggnbp2-012 protein_coding Mus_musculus 0 516
ENSMUST00000168267 Ggnbp2-011 processed_transcript Mus_musculus 0 374
ENSMUST00000132098 Ggnbp2-005 protein_coding Mus_musculus 0.0000000000002 82

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