C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural cell adhesion molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619839 NCAM1-002 ENSG00000149294 9606 + 11:112961275-113275387 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000864 CIL_000864_0001 VISTA 11:112722439-113324450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001928 IEA regulation of exocyst assembly
GO:0005515 IEA protein binding
GO:0005911 IEA cell-cell junction
GO:0007166 IEA cell surface receptor signaling pathway
GO:0009897 IEA external side of plasma membrane
GO:0030424 IEA axon
GO:0030426 IEA growth cone
GO:0031175 IEA neuron projection development
GO:0034109 IEA homotypic cell-cell adhesion
GO:0043025 IEA neuronal cell body
GO:0050850 IEA positive regulation of calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166811 Ncam1-202 protein_coding Mus_musculus 0 1816
ENSMUST00000114476 Ncam1-201 protein_coding Mus_musculus 0 1576
ENSDART00000017229 ncam1a-001 protein_coding Danio_rerio 2e-34 152
ENSDART00000156658 ncam1a-201 protein_coding Danio_rerio 4e-26 124
ENSDART00000101117 ncam1a-003 protein_coding Danio_rerio 5e-25 121

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