C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural cell adhesion molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166811 Ncam1-202 ENSMUSG00000039542 10090 - 9:49504361-49798729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166811
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166811 0.735±0.60 1.092±0.18 10.867±2.42 0.160±0.03 1.170±0.57 0.230±0.07 0.392±0.05 0.354±0.07 0.188±0.02 0.227±0.09 2.026±0.62 2.795±1.90 1.008±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000864 CIL_000864_0002 VISTA 9:49436439-50038292

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316851 NCAM1-001 protein_coding Homo_sapiens 0 3496
ENST00000401611 NCAM1-008 protein_coding Homo_sapiens 0 2844
ENST00000524916 NCAM1-027 protein_coding Homo_sapiens 0 300
ENST00000525355 NCAM1-021 retained_intron Homo_sapiens 0 568
ENST00000525691 NCAM1-022 retained_intron Homo_sapiens 0 329
ENST00000525973 NCAM1-016 processed_transcript Homo_sapiens 0 582
ENST00000526322 NCAM1-009 protein_coding Homo_sapiens 0 479
ENST00000528158 NCAM1-013 processed_transcript Homo_sapiens 0 390
ENST00000528590 NCAM1-012 protein_coding Homo_sapiens 0 1005
ENST00000529356 NCAM1-005 protein_coding Homo_sapiens 0 1563
ENST00000530543 NCAM1-020 protein_coding Homo_sapiens 0 719
ENST00000531044 NCAM1-004 protein_coding Homo_sapiens 0 3439
ENST00000531817 NCAM1-010 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000531927 NCAM1-025 retained_intron Homo_sapiens 0 523
ENST00000533073 NCAM1-011 processed_transcript Homo_sapiens 0 1544
ENST00000533226 NCAM1-026 retained_intron Homo_sapiens 0 446
ENST00000534046 NCAM1-019 retained_intron Homo_sapiens 0 479
ENST00000534516 NCAM1-023 retained_intron Homo_sapiens 0 385
ENST00000611284 NCAM1-007 processed_transcript Homo_sapiens 0 2994
ENST00000613217 NCAM1-018 protein_coding Homo_sapiens 0 483
ENST00000615112 NCAM1-201 protein_coding Homo_sapiens 0 3496
ENST00000615285 NCAM1-202 protein_coding Homo_sapiens 0 2074
ENST00000615525 NCAM1-028 processed_transcript Homo_sapiens 0 261
ENST00000617166 NCAM1-014 processed_transcript Homo_sapiens 0 261
ENST00000618266 NCAM1-203 protein_coding Homo_sapiens 0 3635
ENST00000619839 NCAM1-002 protein_coding Homo_sapiens 0 1816
ENST00000620046 NCAM1-015 protein_coding Homo_sapiens 0 464
ENST00000621128 NCAM1-003 protein_coding Homo_sapiens 0 2830
ENST00000621518 NCAM1-204 protein_coding Homo_sapiens 0 2446
ENST00000621850 NCAM1-006 protein_coding Homo_sapiens 0 2427

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