C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 11 Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622698 PCDH11Y-004 ENSG00000099715 9606 + Y:5000296-5105459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungOvaryPlacentaTestisENST00000622698
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000622698 0.024±0.00 0.053±0.00 0.036±0.00 0.007±0.00 0.022±0.00 0.009±0.00 0.012±0.00 0.002±0.00 0.128±0.07 0.031±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113358 Pcdh11x-001 protein_coding Mus_musculus 0 3236
ENSMUST00000113364 Pcdh11x-202 protein_coding Mus_musculus 0 3236
ENSMUST00000050239 Pcdh11x-201 protein_coding Mus_musculus 0 3201

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