C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622860 TBC1D17-201 ENSG00000104946 9606 + 19:49877425-49888749 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverMuscleENST00000622860
Transcript ID Colon Liver Muscle
ENST00000622860 0.613±0.00 0.776±0.00 4.229±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047085 Tbc1d17-002 protein_coding Mus_musculus 0 1964
ENSMUST00000145959 Tbc1d17-001 nonsense_mediated_decay Mus_musculus 0 1884
ENSMUST00000139947 Tbc1d17-003 retained_intron Mus_musculus 0 1652
ENSMUST00000130081 Tbc1d17-004 retained_intron Mus_musculus 0 1286
ENSMUST00000153161 Tbc1d17-007 retained_intron Mus_musculus 0 464

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