C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dopa decarboxylase (aromatic L-amino acid decarboxylase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622873 DDC-203 ENSG00000132437 9606 - 7:50458438-50561071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyOvaryENST00000622873
Transcript ID Bladder Kidney Ovary
ENST00000622873 5.821±0.00 6.870±0.00 6.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XP CIL_0008XP_0001 VISTA 7:49879868-50480692
CIL_0008P3 CIL_0008P3_0001 VISTA 7:49993452-50594868
CIL_0008XT CIL_0008XT_0001 VISTA 7:50018042-50619048
CIL_0007SD CIL_0007SD_0001 VISTA 7:50081734-50682493
CIL_00089U CIL_00089U_0001 VISTA 7:50196544-50798008
CIL_000642 CIL_000642_0001 CGP 7:50304124-50542535
CIL_0008KL CIL_0008KL_0001 VISTA 7:50358274-50958701
CIL_000641 CIL_000641_0001 CGP 7:50444128-50565457
CIL_0004WV CIL_0004WV_0002 CGP 7:50458436-50793462

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006520 IEA cellular amino acid metabolic process
GO:0016829 IEA lyase activity
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178704 Ddc-202 protein_coding Mus_musculus 0 1133
ENSMUST00000109659 Ddc-201 protein_coding Mus_musculus 0 1133
ENSMUST00000066237 Ddc-001 protein_coding Mus_musculus 0 1133
ENSMUST00000155690 Ddc-002 protein_coding Mus_musculus 0 486
ENSMUST00000146359 Ddc-008 processed_transcript Mus_musculus 0 448
ENSMUST00000136810 Ddc-007 processed_transcript Mus_musculus 0 394
ENSMUST00000134401 Ddc-003 processed_transcript Mus_musculus 0 327

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