C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vinculin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624354 VCL-006 ENSG00000035403 9606 + 10:73998114-74118048 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyOvaryPlacentaTestisENST00000624354
Transcript ID Bladder Breast Colon Kidney Ovary Placenta Testis
ENST00000624354 3.948±0.00 11.050±0.00 7.930±0.00 1.288±0.00 8.711±2.01 24.507±0.00 4.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008T CIL_00008T_0001 CGP 10:73995193-74151063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022369 Vcl-201 protein_coding Mus_musculus 0 3349

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