C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, beta 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002167 cacnb1 7955 - 3:15773660-15847664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000012835 cacnb1-201 15781462-15847634 protein_coding
  ENSDART00000057159 cacnb1-003 15777101-15847471 protein_coding
  ENSDART00000111707 cacnb1-001 15781459-15847664 protein_coding
  ENSDART00000123068 cacnb1-202 15773660-15847471 protein_coding
  ENSDART00000127275 cacnb1-004 15803352-15811794 retained_intron
  ENSDART00000130611 cacnb1-002 15781499-15847471 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123068
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123068 1.918±0.00 2.160±0.00 0.233±0.10 0.044±0.00 1.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TK CIL_0000TK_0001 CGP 3:15754357-15847664
CIL_0000TJ CIL_0000TJ_0001 CGP 3:15773660-15852423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006936 IMP muscle contraction
GO:0016020 ISS membrane
GO:0034765 IMP regulation of ion transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport
GO:0070978 IMP voltage-gated calcium channel complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000067191 CACNB1 calcium channel, voltage-dependent, beta 1 subunit protein_coding Homo_sapiens
ENSMUSG00000020882 Cacnb1 calcium channel, voltage-dependent, beta 1 subunit protein_coding Mus_musculus

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