C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123068 cacnb1-202 ENSDARG00000002167 7955 - 3:15773660-15847471 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123068
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123068 1.918±0.00 2.160±0.00 0.233±0.10 0.044±0.00 1.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TK CIL_0000TK_0001 CGP 3:15754357-15847664
CIL_0000TJ CIL_0000TJ_0001 CGP 3:15773660-15852423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005891 IEA voltage-gated calcium channel complex
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017552 Cacnb1-001 protein_coding Mus_musculus 0 514
ENSMUST00000092736 Cacnb1-002 protein_coding Mus_musculus 0 534
ENSMUST00000103144 Cacnb1-201 protein_coding Mus_musculus 0 534
ENSMUST00000107561 Cacnb1-003 protein_coding Mus_musculus 0 534
ENSMUST00000107562 Cacnb1-004 protein_coding Mus_musculus 0 512

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