C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002167-ENSDARG00000013307 CGP 7955 3:15773660-15852423
GeneTranscriptPositionBiotype
ENSDARG00000013307 (rpl19)
ribosomal protein L19 		ENSDART00000121728 (rpl19-001) 15849892-15852423 protein_coding
ENSDART00000137396 (rpl19-002) 15849908-15852263 retained_intron
ENSDARG00000085639 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121039 (5S_rRNA.1285-201) 15820591-15820709 rRNA
CIL_0000TJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000067191-ENSG00000108298 CGP 9606 17:39173456-39204727
GeneTranscriptPositionBiotype
ENSG00000067191 (CACNB1)
calcium channel, voltage-dependent, beta 1 subunit 		ENST00000344140 (CACNB1-002) 39177136-39197703 protein_coding
ENST00000394303 (CACNB1-001) 39173456-39197703 protein_coding
ENST00000394310 (CACNB1-004) 39177136-39197702 protein_coding
ENST00000492737 (CACNB1-003) 39186542-39193824 processed_transcript
ENST00000536613 (CACNB1-012) 39186423-39193493 retained_intron
ENST00000539338 (CACNB1-005) 39173801-39193883 retained_intron
ENST00000577582 (CACNB1-011) 39184325-39187439 processed_transcript
ENST00000577926 (CACNB1-008) 39192024-39195269 processed_transcript
ENST00000582414 (CACNB1-010) 39191615-39193493 retained_intron
ENST00000582544 (CACNB1-013) 39177417-39178270 retained_intron
ENST00000582877 (CACNB1-009) 39186542-39195071 processed_transcript
ENST00000622445 (CACNB1-201) 39173456-39197703 protein_coding
ENSG00000108298 (RPL19)
ribosomal protein L19 		ENST00000225430 (RPL19-001) 39200283-39204727 protein_coding
ENST00000577741 (RPL19-004) 39202042-39204648 retained_intron
ENST00000577759 (RPL19-008) 39204164-39204727 retained_intron
ENST00000579260 (RPL19-002) 39200342-39204711 protein_coding
ENST00000579374 (RPL19-006) 39200316-39204727 protein_coding
ENST00000580333 (RPL19-005) 39200317-39202753 retained_intron
ENST00000582193 (RPL19-003) 39200345-39204720 protein_coding
ENST00000585199 (RPL19-007) 39201132-39203079 protein_coding
CIL_0000TJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020882-ENSMUSG00000017404 CGP 10090 11:98001508-98030492
GeneTranscriptPositionBiotype
ENSMUSG00000017404 (Rpl19)
ribosomal protein L19 		ENSMUST00000017548 (Rpl19-001) 98026924-98030492 protein_coding
ENSMUST00000092425 (Rpl19-002) 98026710-98030492 protein_coding
ENSMUST00000134435 (Rpl19-003) 98026957-98028147 retained_intron
ENSMUSG00000020882 (Cacnb1)
calcium channel, voltage-dependent, beta 1 subunit 		ENSMUST00000017552 (Cacnb1-001) 98001508-98022634 protein_coding
ENSMUST00000092736 (Cacnb1-002) 98004925-98022634 protein_coding
ENSMUST00000103144 (Cacnb1-201) 98002901-98022627 protein_coding
ENSMUST00000107561 (Cacnb1-003) 98004747-98018372 protein_coding
ENSMUST00000107562 (Cacnb1-004) 98004925-98022634 protein_coding
ENSMUST00000124170 (Cacnb1-005) 98009660-98012551 processed_transcript
ENSMUST00000135462 (Cacnb1-006) 98009625-98023034 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TJ_0001ENSDARG00000013307ENSDART00000121728ENSDART00000137396ENSDARG00000085639ENSDART00000121039CIL_0000TJ_0002ENSG00000067191ENST00000344140ENST00000394303ENST00000394310ENST00000492737ENST00000536613ENST00000539338ENST00000577582ENST00000577926ENST00000582414ENST00000582544ENST00000582877ENST00000622445ENSG00000108298ENST00000225430ENST00000577741ENST00000577759ENST00000579260ENST00000579374ENST00000580333ENST00000582193ENST00000585199CIL_0000TJ_0003ENSMUSG00000017404ENSMUST00000017548ENSMUST00000092425ENSMUST00000134435ENSMUSG00000020882ENSMUST00000017552ENSMUST00000092736ENSMUST00000103144ENSMUST00000107561ENSMUST00000107562ENSMUST00000124170ENSMUST00000135462
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TJ_0001ENSDARG00000013307ENSDART00000121728ENSDARG00000085639ENSDART00000121039CIL_0000TJ_0002ENSG00000067191ENST00000344140ENST00000394303ENST00000394310ENST00000492737ENST00000536613ENST00000539338ENST00000582544ENST00000582877ENST00000622445ENSG00000108298ENST00000225430ENST00000579374CIL_0000TJ_0003ENSMUSG00000017404ENSMUST00000017548ENSMUST00000092425ENSMUST00000134435ENSMUSG00000020882ENSMUST00000017552ENSMUST00000103144ENSMUST00000107561ENSMUST00000107562
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013307 ENSDART00000121728 N/A N/A N/A 388.978±77.25 N/A N/A 925.455±958.87 556.996±194.82 1041.460±0.00 N/A 886.114±0.00 N/A N/A N/A
ENSDART00000137396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000085639 ENSDART00000121039 N/A N/A N/A N/A N/A N/A 1.810±0.00 N/A 0.922±0.00 N/A 3.567±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067191 ENST00000344140 N/A N/A N/A N/A 3.326±2.27 N/A 1.356±0.00 N/A N/A N/A 87.768±77.12 N/A N/A 2.329±0.00
ENST00000394303 N/A N/A N/A 12.979±6.53 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394310 N/A N/A N/A 4.282±0.00 N/A 0.094±0.00 0.059±0.00 N/A 0.628±0.59 0.524±0.37 N/A 0.901±0.47 0.260±0.00 N/A
ENST00000492737 N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A N/A
ENST00000536613 N/A N/A N/A N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539338 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.164±0.03 N/A N/A N/A 0.446±0.00
ENST00000577582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582544 N/A N/A N/A N/A N/A N/A 1.214±0.00 1.598±0.00 N/A 2.710±0.00 N/A N/A N/A N/A
ENST00000582877 N/A N/A 1.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622445 0.985±0.00 1.240±0.00 0.090±0.00 N/A N/A 2.309±0.00 0.210±0.10 0.484±0.00 0.033±0.00 0.724±0.52 N/A 1.566±0.35 0.612±0.00 1.860±0.13
ENSG00000108298 ENST00000225430 302.245±0.00 320.997±0.00 55.350±0.00 100.059±9.02 188.147±72.17 195.334±14.80 50.465±0.83 79.800±16.59 141.889±0.00 101.291±0.00 125.792±2.63 458.263±193.25 247.500±97.50 141.173±44.02
ENST00000577741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579374 438.141±0.00 769.403±0.00 49.184±0.00 112.794±37.21 225.870±86.09 411.873±314.11 145.809±98.61 333.879±181.39 272.145±140.00 643.556±561.00 453.437±368.67 1330.477±1055.11 1075.127±514.72 343.064±100.03
ENST00000580333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017404 ENSMUST00000017548 309.253±121.91 103.315±11.73 765.456±39.85 310.762±162.10 209.450±64.51 277.704±80.76 146.114±23.24 255.621±36.79 432.483±345.96 221.931±16.69 209.982±19.06 409.588±127.22 511.027±330.78 89.860±31.50
ENSMUST00000092425 N/A 88.487±38.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A 318.683±118.22 125.005±0.00 13.740±0.00
ENSMUST00000134435 N/A N/A N/A N/A N/A 378.018±26.75 N/A 210.372±0.00 N/A N/A N/A 470.555±51.34 N/A N/A
ENSMUSG00000020882 ENSMUST00000017552 N/A 3.483±0.96 N/A 24.910±1.84 4.842±1.51 5.888±0.29 N/A N/A N/A 4.928±0.68 16.783±0.00 7.443±0.51 N/A 19.367±1.65
ENSMUST00000092736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103144 N/A N/A N/A 13.788±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.641±0.00
ENSMUST00000107561 N/A N/A N/A N/A 14.942±0.75 N/A N/A N/A N/A N/A 47.355±10.15 N/A N/A N/A
ENSMUST00000107562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.926±0.85
ENSMUST00000124170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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