C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000002369 UBC 7955 + 5:43682726-43714907 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000035235 UBC-001 43682726-43687072 protein_coding
  ENSDART00000123908 UBC-201 43685529-43714907 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000035235ENSDART00000123908
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000035235 22.304±18.81 75.636±51.26 49.601±3.00 22.040±0.00 362.863±0.00
ENSDART00000123908 56.526±5.66 219.905±21.95 94.965±0.00 54.570±0.00 802.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058V CIL_00058V_0001 CGP 5:43672944-43714907

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000150991 UBC ubiquitin C protein_coding Homo_sapiens
ENSG00000170315 UBB ubiquitin B protein_coding Homo_sapiens
ENSMUSG00000008348 Ubc ubiquitin C protein_coding Mus_musculus
ENSMUSG00000019505 Ubb ubiquitin B protein_coding Mus_musculus

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