C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019505 Ubb 10090 + 11:62551171-62553213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019649 Ubb-001 62551171-62553213 protein_coding
  ENSMUST00000136938 Ubb-002 62551676-62552853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019649ENSMUST00000136938
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019649 415.547±24.68 328.996±19.31 707.270±43.44 1303.643±380.83 327.239±92.32 453.801±30.69 250.444±38.01 488.782±68.63 393.301±226.05 456.507±36.40 252.018±17.23 364.883±52.83 459.956±232.67 842.714±393.09
ENSMUST00000136938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 212.319±97.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058V CIL_00058V_0003 CGP 11:62524946-62553213

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005739 ISO mitochondrion
GO:0005829 TAS cytosol
GO:0007141 IMP male meiosis I
GO:0007144 IMP female meiosis I
GO:0008584 IMP male gonad development
GO:0008585 IMP female gonad development
GO:0010992 IMP:IGI ubiquitin homeostasis
GO:0021888 IMP hypothalamus gonadotrophin-releasing hormone neuron development
GO:0043005 ISO neuron projection
GO:0043025 ISO neuronal cell body
GO:0047497 ISO mitochondrion transport along microtubule
GO:0048812 ISO neuron projection morphogenesis
GO:0051881 ISO regulation of mitochondrial membrane potential
GO:0060612 IMP adipose tissue development
GO:0060613 IMP fat pad development
GO:0061136 ISO regulation of proteasomal protein catabolic process
GO:0072520 IMP seminiferous tubule development
GO:0097009 IMP energy homeostasis
GO:1901214 ISO regulation of neuron death
GO:1902255 ISO positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002369 UBC protein_coding Danio_rerio
ENSDARG00000067755 ubc ubiquitin C protein_coding Danio_rerio
ENSG00000150991 UBC ubiquitin C protein_coding Homo_sapiens

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