C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008348 Ubc 10090 - 5:125385965-125390202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108707 Ubc-003 125387659-125389186 protein_coding
  ENSMUST00000136312 Ubc-001 125385965-125390014 protein_coding
  ENSMUST00000156249 Ubc-002 125385977-125390202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108707ENSMUST00000136312ENSMUST00000156249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.434±17.21
ENSMUST00000136312 162.720±31.89 118.166±17.17 113.659±8.84 143.674±126.94 82.700±21.38 154.576±18.71 95.671±11.02 184.313±10.54 121.208±61.77 110.915±12.30 111.384±37.13 144.000±51.53 72.327±28.76 75.856±38.18
ENSMUST00000156249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.622±0.00 N/A 4.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006N CIL_00006N_0003 CGP 5:125277087-125390202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005739 ISO mitochondrion
GO:0005829 TAS cytosol
GO:0007141 IMP male meiosis I
GO:0007144 IMP female meiosis I
GO:0008584 IMP male gonad development
GO:0008585 IMP female gonad development
GO:0010992 IGI ubiquitin homeostasis
GO:0021888 IMP hypothalamus gonadotrophin-releasing hormone neuron development
GO:0043005 ISO neuron projection
GO:0043025 ISO neuronal cell body
GO:0047497 ISO mitochondrion transport along microtubule
GO:0048812 ISO neuron projection morphogenesis
GO:0051881 ISO regulation of mitochondrial membrane potential
GO:0060612 IMP adipose tissue development
GO:0060613 IMP fat pad development
GO:0061136 ISO regulation of proteasomal protein catabolic process
GO:0072520 IMP seminiferous tubule development
GO:0097009 IMP energy homeostasis
GO:1901214 ISO regulation of neuron death
GO:1902255 ISO positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002369 UBC protein_coding Danio_rerio
ENSDARG00000067755 ubc ubiquitin C protein_coding Danio_rerio
ENSG00000150991 UBC ubiquitin C protein_coding Homo_sapiens

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