C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: iroquois homeobox protein 1, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009510 irx1a 7955 + 16:820641-824806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000006726 irx1a-001 820641-824798 protein_coding
  ENSDART00000044190 irx1a-002 820650-824806 protein_coding
  ENSDART00000082371 irx1a-201 820641-824571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000006726
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000006726 3.622±3.43 25.183±17.39 2.697±0.00 0.111±0.00 1.651±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OW CIL_0007OW_0004 UCNEbase 16:429462-1090747
CIL_0003O0 CIL_0003O0_0001 CGP 16:820641-1199727

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007399 IDA nervous system development
GO:0007417 IMP central nervous system development
GO:0021953 IMP central nervous system neuron differentiation
GO:0031076 IMP embryonic camera-type eye development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0042462 IMP eye photoreceptor cell development
GO:0042472 IMP inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0060041 IMP retina development in camera-type eye
GO:0060042 IMP retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170549 IRX1 iroquois homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000060969 Irx1 Iroquois related homeobox 1 (Drosophila) protein_coding Mus_musculus

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