C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11 family interacting protein 3 (class II)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000010764 rab11fip3-201 ENSDARG00000016490 7955 + 24:39226376-39301267 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010764
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010764 5.884±2.43 0.293±0.10 0.787±0.25 0.145±0.00 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031N CIL_00031N_0001 CGP 24:39212205-39301267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262305 RAB11FIP3-001 protein_coding Homo_sapiens 0 375
ENST00000434585 RAB11FIP3-010 protein_coding Homo_sapiens 0 375
ENST00000450428 RAB11FIP3-201 protein_coding Homo_sapiens 0 375
ENST00000461009 RAB11FIP3-007 retained_intron Homo_sapiens 0.0000000000005 79
ENST00000464263 RAB11FIP3-006 retained_intron Homo_sapiens 0.00000000000003 82
ENST00000487899 RAB11FIP3-005 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000610934 RAB11FIP3-202 protein_coding Homo_sapiens 0 375
ENST00000611004 RAB11FIP3-203 protein_coding Homo_sapiens 0 375

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