C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secreted acidic cysteine rich glycoprotein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019353 sparc 7955 - 14:26948448-26966413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039660 sparc-001 26948448-26966413 protein_coding
  ENSDART00000135627 sparc-002 26950996-26966357 protein_coding
  ENSDART00000141304 sparc-004 26952232-26959504 protein_coding
  ENSDART00000141916 sparc-006 26950770-26952567 retained_intron
  ENSDART00000142572 sparc-005 26953539-26959268 retained_intron
  ENSDART00000146022 sparc-003 26954293-26966365 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039660
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039660 28.063±4.80 40.392±17.77 91.230±39.14 0.840±0.00 104.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IC CIL_0007IC_0001 CGP 14:26948448-26995224

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007165 IEA signal transduction
GO:0030916 IMP otic vesicle formation
GO:0032474 IMP otolith morphogenesis
GO:0048752 IMP semicircular canal morphogenesis
GO:0051216 IMP cartilage development
GO:0060037 IMP pharyngeal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) protein_coding Homo_sapiens
ENSMUSG00000018593 Sparc secreted acidic cysteine rich glycoprotein protein_coding Mus_musculus

Loading