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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | secreted acidic cysteine rich glycoprotein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000135627  |
sparc-002 |
ENSDARG00000019353 |
7955 | - |
14:26950996-26966357  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007IC | CIL_0007IC_0001 | CGP | 14:26948448-26995224 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005515 | IEA | protein binding |
| GO:0005578 | IEA | proteinaceous extracellular matrix |
| GO:0007165 | IEA | signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000018737
|
Sparc-001 | protein_coding | Mus_musculus | 0 | 496 |
|
ENSMUST00000108858
|
Sparc-002 | protein_coding | Mus_musculus | 0 | 496 |
|
ENSMUST00000130642
|
Sparc-005 | processed_transcript | Mus_musculus | 0 | 403 |
|
ENSMUST00000141530
|
Sparc-003 | protein_coding | Mus_musculus | 0 | 291 |
|
ENST00000231061
|
SPARC-001 | protein_coding | Homo_sapiens | 0 | 436 |
|
ENST00000521569
|
SPARC-005 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000524277
|
SPARC-006 | retained_intron | Homo_sapiens | 0 | 303 |
|
ENST00000538026
|
SPARC-008 | protein_coding | Homo_sapiens | 0 | 425 |
|
ENST00000620972
|
SPARC-201 | protein_coding | Homo_sapiens | 0 | 436 |
