C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XII, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019601 col12a1b 7955 - 20:49761926-49993603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025926 col12a1b-201 49761926-49993603 protein_coding
  ENSDART00000151239 col12a1b-002 49926504-49961600 protein_coding
  ENSDART00000151248 col12a1b-001 49807729-49968441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000025926
Transcript ID Brain Heart
ENSDART00000025926 0.205±0.00 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061X CIL_00061X_0001 CGP 20:49424779-49993603
CIL_000624 CIL_000624_0001 CGP 20:49761926-50016668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111799 COL12A1 collagen, type XII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000032332 Col12a1 collagen, type XII, alpha 1 protein_coding Mus_musculus

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