C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XII, alpha 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000025926 col12a1b-201 ENSDARG00000019601 7955 - 20:49761926-49993603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000025926
Transcript ID Brain Heart
ENSDART00000025926 0.205±0.00 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061X CIL_00061X_0001 CGP 20:49424779-49993603
CIL_000624 CIL_000624_0001 CGP 20:49761926-50016668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071750 Col12a1-001 protein_coding Mus_musculus 2e-24 121
ENSMUST00000135009 Col12a1-003 protein_coding Mus_musculus 3e-25 121
ENST00000322507 COL12A1-001 protein_coding Homo_sapiens 2e-24 121
ENST00000425443 COL12A1-008 protein_coding Homo_sapiens 6e-25 121
ENST00000611354 COL12A1-201 protein_coding Homo_sapiens 2e-24 121
ENST00000615798 COL12A1-202 protein_coding Homo_sapiens 2e-24 121

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