C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000624_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019601-ENSDARG00000086341 CGP 7955 20:49761926-50016668
GeneTranscriptPositionBiotype
ENSDARG00000019601 (col12a1b)
collagen, type XII, alpha 1b 		ENSDART00000025926 (col12a1b-201) 49761926-49993603 protein_coding
ENSDART00000151239 (col12a1b-002) 49926504-49961600 protein_coding
ENSDART00000151248 (col12a1b-001) 49807729-49968441 protein_coding
ENSDARG00000086341 (CABZ01013938.1)
Uncharacterized protein 		ENSDART00000129214 (CABZ01013938.1-201) 50009216-50016668 protein_coding
CIL_000624_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078322-ENSDARG00000053217 CGP 7955 17:50299665-50509536
GeneTranscriptPositionBiotype
ENSDARG00000053217 (cox7a2a)
cytochrome c oxidase, subunit VIIa 2a 		ENSDART00000075223 (cox7a2a-001) 50497327-50509536 protein_coding
ENSDART00000155272 (cox7a2a-003) 50501574-50509536 retained_intron
ENSDART00000155446 (cox7a2a-002) 50497328-50509523 nonsense_mediated_decay
CIL_000624_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111799-ENSG00000112695 CGP 9606 6:75084326-75250323
GeneTranscriptPositionBiotype
ENSG00000111799 (COL12A1)
collagen, type XII, alpha 1 		ENST00000322507 (COL12A1-001) 75084326-75206051 protein_coding
ENST00000345356 (COL12A1-002) 75086471-75205851 protein_coding
ENST00000416123 (COL12A1-009) 75086547-75202792 protein_coding
ENST00000419671 (COL12A1-007) 75133376-75152189 protein_coding
ENST00000425443 (COL12A1-008) 75084326-75119473 protein_coding
ENST00000474564 (COL12A1-005) 75143204-75146285 retained_intron
ENST00000483888 (COL12A1-003) 75087190-75205822 protein_coding
ENST00000486533 (COL12A1-004) 75177652-75188464 retained_intron
ENST00000493109 (COL12A1-006) 75113022-75119058 protein_coding
ENST00000511023 (COL12A1-010) 75089160-75101911 processed_transcript
ENST00000611354 (COL12A1-201) 75084326-75205907 protein_coding
ENST00000615798 (COL12A1-202) 75084326-75205907 protein_coding
ENSG00000112695 (COX7A2)
cytochrome c oxidase subunit VIIa polypeptide 2 (liver) 		ENST00000370081 (COX7A2-002) 75237675-75250323 protein_coding
ENST00000370089 (COX7A2-003) 75237684-75244009 protein_coding
ENST00000377978 (COX7A2-007) 75240301-75243790 protein_coding
ENST00000459637 (COX7A2-001) 75237787-75243787 nonsense_mediated_decay
ENST00000460985 (COX7A2-005) 75237789-75243788 protein_coding
ENST00000472311 (COX7A2-006) 75237823-75243785 protein_coding
ENST00000481061 (COX7A2-004) 75240445-75243809 retained_intron
ENST00000509698 (COX7A2-008) 75237787-75243795 protein_coding
CIL_000624_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032332-ENSMUSG00000032330 CGP 10090 9:79598991-79759853
GeneTranscriptPositionBiotype
ENSMUSG00000032330 (Cox7a2)
cytochrome c oxidase subunit VIIa 2 		ENSMUST00000034881 (Cox7a2-201) 79755241-79759853 protein_coding
ENSMUSG00000032332 (Col12a1)
collagen, type XII, alpha 1 		ENSMUST00000071750 (Col12a1-001) 79598991-79718518 protein_coding
ENSMUST00000121227 (Col12a1-002) 79601759-79718720 protein_coding
ENSMUST00000122827 (Col12a1-004) 79712534-79718831 retained_intron
ENSMUST00000135009 (Col12a1-003) 79598991-79612970 protein_coding
ENSMUST00000141667 (Col12a1-005) 79714905-79718494 retained_intron
ENSMUST00000150289 (Col12a1-006) 79692028-79718720 retained_intron
ENSMUSG00000086608 (4930562D21Rik)
RIKEN cDNA 4930562D21 gene 		ENSMUST00000123894 (4930562D21Rik-001) 79688776-79690907 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000624_0001ENSDARG00000019601ENSDART00000025926ENSDART00000151239ENSDART00000151248ENSDARG00000086341ENSDART00000129214CIL_000624_0002ENSDARG00000053217ENSDART00000075223ENSDART00000155272ENSDART00000155446CIL_000624_0003ENSG00000111799ENST00000322507ENST00000345356ENST00000416123ENST00000419671ENST00000425443ENST00000474564ENST00000483888ENST00000486533ENST00000493109ENST00000511023ENST00000611354ENST00000615798ENSG00000112695ENST00000370081ENST00000370089ENST00000377978ENST00000459637ENST00000460985ENST00000472311ENST00000481061ENST00000509698CIL_000624_0004ENSMUSG00000032330ENSMUST00000034881ENSMUSG00000032332ENSMUST00000071750ENSMUST00000121227ENSMUST00000122827ENSMUST00000135009ENSMUST00000141667ENSMUST00000150289ENSMUSG00000086608ENSMUST00000123894
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000624_0001ENSDARG00000019601ENSDART00000025926ENSDARG00000086341ENSDART00000129214CIL_000624_0002ENSDARG00000053217ENSDART00000075223ENSDART00000155446CIL_000624_0003ENSG00000111799ENST00000322507ENST00000345356ENST00000416123ENST00000419671ENST00000425443ENST00000483888ENST00000486533ENST00000511023ENST00000611354ENST00000615798ENSG00000112695ENST00000370081ENST00000370089ENST00000459637ENST00000460985ENST00000472311ENST00000481061ENST00000509698CIL_000624_0004ENSMUSG00000032330ENSMUST00000034881ENSMUSG00000032332ENSMUST00000071750ENSMUST00000121227ENSMUST00000122827ENSMUST00000135009ENSMUST00000150289ENSMUSG00000086608ENSMUST00000123894
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019601 ENSDART00000025926 N/A N/A N/A 0.205±0.00 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086341 ENSDART00000129214 N/A N/A N/A 9.344±2.29 N/A N/A 61.767±22.84 245.891±0.00 25.655±0.00 N/A 17.926±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053217 ENSDART00000075223 N/A N/A N/A 105.746±102.40 N/A N/A 59.785±3.86 45.111±0.00 9.086±0.00 N/A 25.921±0.00 N/A N/A N/A
ENSDART00000155272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155446 N/A N/A N/A 28.412±0.00 N/A N/A 11.828±0.26 24.154±0.00 N/A N/A 7.580±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111799 ENST00000322507 N/A N/A N/A N/A 9.556±0.00 3.144±0.00 1.039±0.00 0.159±0.00 9.556±0.00 2.050±1.09 N/A 8.090±3.88 0.421±0.33 N/A
ENST00000345356 N/A N/A N/A 0.415±0.00 7.620±0.00 10.822±0.00 1.238±0.00 1.961±0.00 8.218±0.00 1.971±0.00 0.884±0.00 21.072±0.00 N/A 2.270±1.89
ENST00000416123 N/A N/A N/A 0.409±0.00 6.663±0.00 N/A N/A 0.589±0.00 N/A 2.821±0.00 N/A N/A N/A N/A
ENST00000419671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.400±0.00 N/A N/A N/A
ENST00000425443 33.937±0.00 19.055±0.00 N/A 0.410±0.00 18.638±0.00 17.046±0.00 2.493±0.00 4.378±0.00 0.449±0.00 2.733±0.00 N/A 21.296±14.01 1.455±0.69 4.595±3.09
ENST00000474564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.394±5.14 N/A N/A
ENST00000486533 N/A N/A 6.028±0.00 N/A N/A N/A N/A N/A N/A 7.996±0.00 N/A N/A N/A N/A
ENST00000493109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.430±0.00
ENST00000611354 N/A N/A N/A 0.267±0.17 2.580±0.00 5.851±0.00 0.377±0.00 0.835±0.00 N/A N/A 0.676±0.00 N/A N/A N/A
ENST00000615798 7.205±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112695 ENST00000370081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.316±0.00
ENST00000370089 N/A N/A 4.304±0.00 72.555±0.00 15.195±0.00 24.060±0.00 27.533±0.00 28.354±0.00 7.095±0.00 5.754±0.00 14.153±0.00 30.306±24.39 102.408±0.00 60.271±0.00
ENST00000377978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459637 N/A N/A N/A N/A N/A N/A N/A N/A 7.444±0.00 9.153±0.00 N/A N/A N/A N/A
ENST00000460985 58.010±0.00 68.060±0.00 5.546±0.00 N/A 44.620±36.94 122.832±0.00 182.921±0.00 214.956±0.00 146.688±0.00 118.123±0.00 13.538±6.93 51.541±45.26 49.163±0.00 302.915±0.00
ENST00000472311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.204±0.00 43.816±11.73 54.399±14.48 117.125±0.00
ENST00000481061 N/A N/A 2.231±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.057±0.00 N/A N/A
ENST00000509698 46.865±0.00 72.443±0.00 N/A 48.914±0.00 85.323±0.00 74.427±0.00 95.206±0.00 99.615±0.00 66.871±0.00 61.670±0.00 N/A 18.806±0.00 28.529±0.00 225.313±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032330 ENSMUST00000034881 124.622±42.74 30.282±5.84 161.974±21.35 71.396±36.15 117.864±70.29 97.054±4.36 295.566±37.49 282.319±49.60 167.348±64.11 56.608±5.33 179.946±12.55 51.993±30.65 108.501±84.49 277.271±15.69
ENSMUSG00000032332 ENSMUST00000071750 1.360±1.14 0.363±0.00 7.274±1.63 1.512±1.14 1.837±0.63 4.342±0.72 0.190±0.05 0.728±0.28 0.224±0.17 2.568±1.26 0.311±0.13 2.843±1.02 3.606±1.72 1.184±0.57
ENSMUST00000121227 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A
ENSMUST00000122827 N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135009 1.226±0.08 2.410±0.30 41.586±0.00 2.641±1.32 1.836±0.50 10.624±0.50 0.295±0.04 2.021±0.17 0.736±0.34 6.045±1.30 1.135±0.38 5.392±1.18 7.091±4.08 1.017±0.00
ENSMUST00000141667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150289 N/A 1.638±0.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.383±0.00 N/A N/A
ENSMUSG00000086608 ENSMUST00000123894 N/A N/A 0.026±0.00 0.015±0.00 N/A N/A N/A N/A 0.003±0.00 0.042±0.00 N/A N/A 0.024±0.00 1.589±0.45

Loading