C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MAD homolog 9 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000021938 smad9 7955 - 10:35985042-36004657 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000028618 smad9-201 35985042-36004154 protein_coding
  ENSDART00000132823 smad9-001 35985042-36004657 protein_coding
  ENSDART00000138281 smad9-003 35989202-35993341 retained_intron
  ENSDART00000145509 smad9-002 35989411-36000161 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000028618ENSDART00000132823
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000028618 4.011±0.79 63.057±49.42 14.281±10.37 N/A 2.645±0.00
ENSDART00000132823 N/A 3.694±1.15 0.609±0.00 0.770±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CB CIL_0004CB_0001 CGP 10:35982021-36004657
CIL_0000PF CIL_0000PF_0001 CGP 10:35985042-36026169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120693 SMAD9 SMAD family member 9 protein_coding Homo_sapiens
ENSMUSG00000027796 Smad9 SMAD family member 9 protein_coding Mus_musculus

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