C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MAD homolog 9 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000028618 smad9-201 ENSDARG00000021938 7955 - 10:35985042-36004154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000028618
Transcript ID Brain Heart Kidney Muscle
ENSDART00000028618 4.011±0.79 63.057±49.42 14.281±10.37 2.645±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CB CIL_0004CB_0001 CGP 10:35982021-36004657
CIL_0000PF CIL_0000PF_0001 CGP 10:35985042-36026169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066091 Smad1-001 protein_coding Mus_musculus 0 459
ENSMUST00000109885 Smad1-002 protein_coding Mus_musculus 0 316

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