C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pumilio homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000023145 pum1 7955 + 19:44640552-44693855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000122308 pum1-201 44657609-44692582 protein_coding
  ENSDART00000127137 pum1-202 44640552-44693855 protein_coding
  ENSDART00000143842 pum1-001 44640553-44686960 protein_coding
  ENSDART00000148791 pum1-004 44640560-44668772 protein_coding
  ENSDART00000149278 pum1-002 44675588-44682573 retained_intron
  ENSDART00000149857 pum1-003 44677538-44682733 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000127137ENSDART00000149857
Transcript ID Brain Heart Kidney
ENSDART00000127137 4.779±0.69 8.045±3.95 7.947±0.85
ENSDART00000149857 N/A 1.978±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AG CIL_0002AG_0001 CGP 19:44620667-44693855
CIL_0002AF CIL_0002AF_0001 CGP 19:44640552-44782072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134644 PUM1 pumilio RNA-binding family member 1 protein_coding Homo_sapiens
ENSMUSG00000028580 Pum1 pumilio RNA-binding family member 1 protein_coding Mus_musculus

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