C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pumilio homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122308 pum1-201 ENSDARG00000023145 7955 + 19:44657609-44692582 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AG CIL_0002AG_0001 CGP 19:44620667-44693855
CIL_0002AF CIL_0002AF_0001 CGP 19:44640552-44782072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020915 Pum2-003 protein_coding Mus_musculus 0 512
ENSMUST00000030315 Pum1-001 protein_coding Mus_musculus 0 887
ENSMUST00000097862 Pum1-004 protein_coding Mus_musculus 0 887
ENSMUST00000097864 Pum1-003 protein_coding Mus_musculus 0 859
ENSMUST00000105991 Pum1-201 protein_coding Mus_musculus 0 859
ENSMUST00000105992 Pum1-202 protein_coding Mus_musculus 0 887
ENSMUST00000111122 Pum2-001 protein_coding Mus_musculus 0 531
ENSMUST00000111123 Pum2-002 protein_coding Mus_musculus 0 531
ENSMUST00000163569 Pum2-006 protein_coding Mus_musculus 0 558
ENSMUST00000165293 Pum2-004 nonsense_mediated_decay Mus_musculus 0 512
ENSMUST00000168361 Pum2-201 protein_coding Mus_musculus 0 558
ENSMUST00000169089 Pum2-005 protein_coding Mus_musculus 0 512
ENSMUST00000178015 Pum2-202 protein_coding Mus_musculus 0 512
ENST00000257075 PUM1-001 protein_coding Homo_sapiens 0 854
ENST00000319801 PUM2-201 protein_coding Homo_sapiens 0 488
ENST00000338086 PUM2-001 protein_coding Homo_sapiens 0 507
ENST00000361078 PUM2-202 protein_coding Homo_sapiens 0 507
ENST00000373741 PUM1-002 protein_coding Homo_sapiens 0 881
ENST00000373742 PUM1-011 protein_coding Homo_sapiens 0 854
ENST00000373747 PUM1-004 protein_coding Homo_sapiens 0 881
ENST00000403432 PUM2-002 protein_coding Homo_sapiens 0 507
ENST00000424085 PUM1-014 protein_coding Homo_sapiens 0 854
ENST00000426105 PUM1-010 protein_coding Homo_sapiens 0 881
ENST00000440538 PUM1-013 protein_coding Homo_sapiens 0 881
ENST00000440577 PUM2-003 protein_coding Homo_sapiens 0 488
ENST00000498419 PUM1-005 protein_coding Homo_sapiens 0 881
ENST00000525843 PUM1-012 protein_coding Homo_sapiens 0 798
ENST00000530669 PUM1-023 nonsense_mediated_decay Homo_sapiens 0 254

Loading