C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000031637 pan3 7955 + 24:22328252-22356648 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000048273 pan3-001 22328269-22356648 protein_coding
  ENSDART00000132364 pan3-004 22338039-22338823 retained_intron
  ENSDART00000137952 pan3-003 22328428-22356648 processed_transcript
  ENSDART00000147250 pan3-002 22328252-22332942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000048273ENSDART00000137952ENSDART00000147250
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000048273 6.643±1.96 1.498±1.17 5.557±0.00 0.916±0.00 3.233±0.00
ENSDART00000137952 N/A 2.133±0.00 N/A N/A N/A
ENSDART00000147250 N/A 0.581±0.09 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G0 CIL_0000G0_0001 CGP 24:22299887-22356648
CIL_0000G1 CIL_0000G1_0001 CGP 24:22328252-22416767

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000152520 PAN3 PAN3 poly(A) specific ribonuclease subunit protein_coding Homo_sapiens
ENSMUSG00000029647 Pan3 PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae) protein_coding Mus_musculus

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