C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000176_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087152-ENSDARG00000036316 CGP 7955 14:34305436-34309051
GeneTranscriptPositionBiotype
ENSDARG00000036316 (rpl39)
ribosomal protein L39 		ENSDART00000052761 (rpl39-001) 34306765-34309051 protein_coding
ENSDART00000146274 (rpl39-002) 34306764-34308937 retained_intron
ENSDART00000146999 (rpl39-003) 34308032-34309011 retained_intron
ENSDARG00000087152 (SOWAHD)
sosondowah ankyrin repeat domain family member D 		ENSDART00000130867 (SOWAHD-201) 34305436-34306468 protein_coding
CIL_000176_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187808-ENSG00000198918 CGP 9606 X:119758613-119791643
GeneTranscriptPositionBiotype
ENSG00000187808 (SOWAHD)
sosondowah ankyrin repeat domain family member D 		ENST00000343905 (SOWAHD-001) 119758613-119760164 protein_coding
ENSG00000198918 (RPL39)
ribosomal protein L39 		ENST00000361575 (RPL39-001) 119786506-119791643 protein_coding
ENST00000468844 (RPL39-002) 119786506-119791595 processed_transcript
ENST00000477403 (RPL39-004) 119786504-119787456 processed_transcript
CIL_000176_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044400-ENSMUSG00000079641 CGP 10090 X:37048845-37085402
GeneTranscriptPositionBiotype
ENSMUSG00000044400 (Sowahd)
sosondowah ankyrin repeat domain family member D 		ENSMUST00000060057 (Sowahd-001) 37048845-37050418 protein_coding
ENSMUSG00000065642 (Snora69)
small nucleolar RNA, H/ACA box 69 		ENSMUST00000083708 (Snora69-201) 37082912-37083042 snoRNA
ENSMUSG00000079641 (Rpl39)
ribosomal protein L39 		ENSMUST00000115231 (Rpl39-001) 37082520-37085402 protein_coding
ENSMUST00000131149 (Rpl39-003) 37084537-37085156 retained_intron
ENSMUST00000138799 (Rpl39-002) 37083643-37085166 retained_intron
ENSMUSG00000093059 (Gm24809)
predicted gene, 24809 		ENSMUST00000175318 (Gm24809-201) 37071992-37072262 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000176_0001ENSDARG00000036316ENSDART00000052761ENSDART00000146274ENSDART00000146999ENSDARG00000087152ENSDART00000130867CIL_000176_0002ENSG00000187808ENST00000343905ENSG00000198918ENST00000361575ENST00000468844ENST00000477403CIL_000176_0003ENSMUSG00000044400ENSMUST00000060057ENSMUSG00000065642ENSMUST00000083708ENSMUSG00000079641ENSMUST00000115231ENSMUST00000131149ENSMUST00000138799ENSMUSG00000093059ENSMUST00000175318
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000176_0001ENSDARG00000036316ENSDART00000052761ENSDART00000146274ENSDART00000146999ENSDARG00000087152ENSDART00000130867CIL_000176_0002ENSG00000187808ENST00000343905ENSG00000198918ENST00000361575CIL_000176_0003ENSMUSG00000044400ENSMUST00000060057ENSMUSG00000065642ENSMUST00000083708ENSMUSG00000079641ENSMUST00000115231ENSMUSG00000093059ENSMUST00000175318
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036316 ENSDART00000052761 N/A N/A N/A 128.282±146.80 N/A N/A 1136.860±435.93 374.612±346.80 635.923±0.00 N/A 803.574±0.00 N/A N/A N/A
ENSDART00000146274 N/A N/A N/A 3.322±2.77 N/A N/A 41.488±0.00 59.276±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000146999 N/A N/A N/A 0.287±0.06 N/A N/A 0.884±0.00 2.195±0.44 N/A N/A N/A N/A N/A N/A
ENSDARG00000087152 ENSDART00000130867 N/A N/A N/A 0.363±0.00 N/A N/A 2.892±0.00 3.441±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187808 ENST00000343905 0.230±0.00 4.217±0.00 N/A 0.164±0.00 0.128±0.05 0.417±0.00 0.053±0.00 0.592±0.00 0.129±0.00 0.722±0.47 0.094±0.00 0.566±0.36 7.048±2.32 5.164±2.94
ENSG00000198918 ENST00000361575 545.105±0.00 945.109±0.00 55.116±0.00 87.263±8.67 289.331±95.56 361.758±177.77 172.187±101.12 164.850±10.13 312.156±134.04 509.922±361.91 348.703±184.13 981.414±670.53 853.658±402.22 196.280±94.19
ENST00000468844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044400 ENSMUST00000060057 0.029±0.01 0.271±0.19 N/A 0.033±0.04 0.034±0.01 N/A N/A 0.120±0.03 0.031±0.02 0.031±0.01 N/A 0.054±0.02 3.267±1.87 1.329±0.28
ENSMUSG00000065642 ENSMUST00000083708 N/A N/A 12.244±0.00 13.312±0.00 N/A N/A N/A N/A 45.698±0.36 N/A N/A 13.019±1.66 9.519±4.06 N/A
ENSMUSG00000079641 ENSMUST00000115231 40.745±11.41 3.014±0.60 448.639±25.16 117.111±43.21 44.162±28.12 30.694±12.89 26.878±1.90 43.595±10.73 230.220±231.42 28.361±1.74 152.166±15.06 127.236±231.27 318.293±113.76 7.642±2.50
ENSMUST00000131149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093059 ENSMUST00000175318 0.477±0.00 1.202±0.65 0.335±0.06 1.225±0.99 0.547±0.00 N/A 0.616±0.00 0.424±0.17 0.319±0.34 0.445±0.00 N/A 1.063±0.49 0.310±0.19 0.888±0.81

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