C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prospero-related homeobox gene 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055158 prox1a 7955 - 17:33028346-33071546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077476 prox1a-001 33028346-33071546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077476
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077476 4.292±1.08 31.310±22.80 16.562±1.49 4.848±0.00 1.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z6 CIL_0003Z6_0001 CGP 17:32951521-33071546
CIL_0007J3 CIL_0007J3_0003 UCNEbase 17:33018650-33348984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001946 IGI lymphangiogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0021884 IMP forebrain neuron development
GO:0030239 IMP myofibril assembly
GO:0043433 IDA negative regulation of sequence-specific DNA binding transcription factor activity
GO:0048885 IMP neuromast deposition
GO:0048886 IMP neuromast hair cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117707 PROX1 prospero homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000010175 Prox1 prospero homeobox 1 protein_coding Mus_musculus

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