C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003Z6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055151-ENSDARG00000055158 CGP 7955 17:32951521-33071546
GeneTranscriptPositionBiotype
ENSDARG00000055151 (smyd2a)
SET and MYND domain containing 2a
ENSDART00000077459 (smyd2a-001) 32951521-32985314 protein_coding
ENSDART00000123645 (smyd2a-002) 32969101-32985163 processed_transcript
ENSDART00000135371 (smyd2a-003) 32980675-32985200 processed_transcript
ENSDART00000142356 (smyd2a-004) 32955933-32959042 processed_transcript
ENSDART00000146339 (smyd2a-005) 32952150-32958663 processed_transcript
ENSDARG00000055158 (prox1a)
prospero-related homeobox gene 1a
ENSDART00000077476 (prox1a-001) 33028346-33071546 protein_coding
CIL_0003Z6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026603-ENSMUSG00000010175 CGP 10090 1:189880492-190170714
GeneTranscriptPositionBiotype
ENSMUSG00000010175 (Prox1)
prospero homeobox 1
ENSMUST00000010319 (Prox1-003) 190122453-190169399 protein_coding
ENSMUST00000175916 (Prox1-001) 190118035-190170714 protein_coding
ENSMUST00000177288 (Prox1-002) 190121775-190170233 protein_coding
ENSMUSG00000026603 (Smyd2)
SET and MYND domain containing 2
ENSMUST00000027897 (Smyd2-001) 189880492-189922363 protein_coding
ENSMUST00000130804 (Smyd2-003) 189880494-189889002 processed_transcript
ENSMUST00000132289 (Smyd2-004) 189880642-189882372 retained_intron
ENSMUST00000144452 (Smyd2-002) 189885046-189922253 retained_intron
ENSMUSG00000079045 (Prox1os)
prospero homeobox 1, opposite strand
ENSMUST00000110279 (Prox1os-001) 190170296-190217276 antisense
ENSMUSG00000099404 (RP23-190F21.1)
predicted gene 28172
ENSMUST00000189880 (RP23-190F21.1-001) 190168670-190169633 antisense
ENSMUSG00000101293 (RP23-190F21.2)
ENSMUST00000186611 (RP23-190F21.2-001) 190163690-190164612 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Z6_0001ENSDARG00000055151ENSDART00000077459ENSDART00000123645ENSDART00000135371ENSDART00000142356ENSDART00000146339ENSDARG00000055158ENSDART00000077476CIL_0003Z6_0002ENSMUSG00000010175ENSMUST00000010319ENSMUST00000175916ENSMUST00000177288ENSMUSG00000026603ENSMUST00000027897ENSMUST00000130804ENSMUST00000132289ENSMUST00000144452ENSMUSG00000079045ENSMUST00000110279ENSMUSG00000099404ENSMUST00000189880ENSMUSG00000101293ENSMUST00000186611
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Z6_0001ENSDARG00000055151ENSDART00000077459ENSDARG00000055158ENSDART00000077476CIL_0003Z6_0002ENSMUSG00000010175ENSMUST00000010319ENSMUST00000175916ENSMUST00000177288ENSMUSG00000026603ENSMUST00000027897ENSMUST00000130804ENSMUST00000132289ENSMUSG00000079045ENSMUST00000110279ENSMUSG00000099404ENSMUST00000189880ENSMUSG00000101293ENSMUST00000186611
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055151 ENSDART00000077459 N/A N/A N/A 54.395±14.64 N/A N/A 29.026±2.16 10.606±0.00 0.846±0.00 N/A 16.841±0.00 N/A N/A N/A
ENSDART00000123645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055158 ENSDART00000077476 N/A N/A N/A 4.292±1.08 N/A N/A 31.310±22.80 16.562±1.49 4.848±0.00 N/A 1.035±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010175 ENSMUST00000010319 N/A N/A N/A 1.983±0.00 0.237±0.00 0.207±0.00 1.424±0.00 0.632±0.22 N/A N/A N/A 0.369±0.00 0.086±0.00 2.108±0.68
ENSMUST00000175916 0.577±0.49 11.261±0.81 0.321±0.02 3.310±2.20 1.194±0.40 0.756±0.12 3.641±1.52 1.328±0.30 7.593±4.25 0.567±0.08 0.451±0.07 1.170±0.64 0.144±0.10 0.394±0.00
ENSMUST00000177288 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A
ENSMUSG00000026603 ENSMUST00000027897 20.877±4.70 26.029±1.43 24.740±4.94 30.439±20.19 20.456±6.30 11.780±2.66 31.004±5.69 11.549±0.69 11.282±3.50 7.629±0.72 121.196±7.86 32.947±8.51 35.454±16.14 6.995±1.11
ENSMUST00000130804 10.015±1.36 N/A 7.287±0.00 8.467±0.00 10.662±3.18 5.694±0.00 14.875±5.20 6.087±0.35 4.722±1.83 2.163±0.24 N/A 17.527±4.67 14.560±2.01 N/A
ENSMUST00000132289 N/A N/A N/A 45.438±0.00 N/A N/A N/A N/A N/A N/A N/A 40.760±0.00 59.537±13.00 11.211±0.00
ENSMUST00000144452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079045 ENSMUST00000110279 N/A N/A N/A N/A N/A N/A N/A N/A 18.729±1.40 N/A N/A N/A N/A 2.419±0.00
ENSMUSG00000099404 ENSMUST00000189880 N/A 1.017±0.32 N/A 0.129±0.03 0.098±0.01 0.192±0.00 0.277±0.11 0.230±0.08 0.474±0.31 N/A N/A 0.280±0.01 N/A N/A
ENSMUSG00000101293 ENSMUST00000186611 N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A N/A

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