C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00031U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002355-ENSDARG00000059883 CGP 7955 5:43743288-43777138
GeneTranscriptPositionBiotype
ENSDARG00000002355 (shpk)
sedoheptulokinase
ENSDART00000020044 (shpk-001) 43743288-43751407 protein_coding
ENSDART00000156372 (shpk-201) 43743356-43751371 protein_coding
ENSDARG00000059883 (trpv1)
transient receptor potential cation channel, subfamily V, member 1
ENSDART00000083731 (trpv1-201) 43754941-43777138 protein_coding
ENSDART00000140743 (trpv1-001) 43760511-43774636 protein_coding
CIL_00031U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005951-ENSMUSG00000005952 CGP 10090 11:73199460-73261242
GeneTranscriptPositionBiotype
ENSMUSG00000005951 (Shpk)
sedoheptulokinase
ENSMUST00000006105 (Shpk-002) 73199460-73224511 protein_coding
ENSMUST00000131927 (Shpk-001) 73199460-73224502 nonsense_mediated_decay
ENSMUSG00000005952 (Trpv1)
transient receptor potential cation channel, subfamily V, member 1
ENSMUST00000006106 (Trpv1-002) 73238259-73260507 protein_coding
ENSMUST00000102526 (Trpv1-001) 73234292-73261239 protein_coding
ENSMUST00000108470 (Trpv1-003) 73240046-73261242 protein_coding
ENSMUST00000128113 (Trpv1-005) 73252371-73254284 processed_transcript
ENSMUST00000138853 (Trpv1-004) 73240310-73254884 protein_coding
ENSMUSG00000082405 (Gm16021)
predicted gene 16021
ENSMUST00000121176 (Gm16021-001) 73226048-73226266 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031U_0001ENSDARG00000002355ENSDART00000020044ENSDART00000156372ENSDARG00000059883ENSDART00000083731ENSDART00000140743CIL_00031U_0002ENSMUSG00000005951ENSMUST00000006105ENSMUST00000131927ENSMUSG00000005952ENSMUST00000006106ENSMUST00000102526ENSMUST00000108470ENSMUST00000128113ENSMUST00000138853ENSMUSG00000082405ENSMUST00000121176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031U_0001ENSDARG00000002355ENSDART00000020044ENSDART00000156372ENSDARG00000059883ENSDART00000083731ENSDART00000140743CIL_00031U_0002ENSMUSG00000005951ENSMUST00000006105ENSMUST00000131927ENSMUSG00000005952ENSMUST00000006106ENSMUST00000102526ENSMUST00000108470ENSMUST00000128113ENSMUST00000138853ENSMUSG00000082405ENSMUST00000121176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002355 ENSDART00000020044 N/A N/A N/A 0.263±0.11 N/A N/A N/A N/A 0.327±0.00 N/A 0.118±0.00 N/A N/A N/A
ENSDART00000156372 N/A N/A N/A 0.456±0.36 N/A N/A 0.181±0.01 0.456±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000059883 ENSDART00000083731 N/A N/A N/A 0.381±0.18 N/A N/A 0.705±0.43 1.124±0.75 0.094±0.00 N/A 0.190±0.00 N/A N/A N/A
ENSDART00000140743 N/A N/A N/A 0.247±0.00 N/A N/A 0.473±0.00 1.086±0.00 0.131±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005951 ENSMUST00000006105 5.483±1.33 7.085±0.48 5.928±0.20 0.742±0.19 6.677±1.05 6.112±0.98 0.703±0.15 8.653±1.10 14.059±11.56 1.162±0.47 0.260±0.04 1.829±0.64 1.954±1.28 0.654±0.26
ENSMUST00000131927 N/A 1.187±0.12 N/A 0.100±0.00 N/A N/A N/A N/A N/A 0.356±0.00 N/A 0.534±0.00 N/A 0.188±0.00
ENSMUSG00000005952 ENSMUST00000006106 0.240±0.00 0.224±0.00 N/A N/A 0.916±0.50 0.074±0.00 N/A 0.051±0.02 0.046±0.04 0.038±0.01 0.027±0.00 0.196±0.07 0.088±0.09 0.210±0.11
ENSMUST00000102526 0.944±0.54 0.352±0.08 0.088±0.00 0.052±0.03 0.712±0.27 0.150±0.05 0.056±0.01 0.028±0.00 0.008±0.00 0.109±0.04 0.080±0.01 0.151±0.10 0.404±0.00 0.256±0.15
ENSMUST00000108470 N/A N/A 0.052±0.00 N/A N/A 0.271±0.00 0.049±0.00 N/A 0.002±0.00 0.026±0.00 0.061±0.02 0.130±0.06 0.225±0.00 0.109±0.00
ENSMUST00000128113 N/A 0.870±0.00 N/A N/A 3.047±1.06 0.462±0.25 N/A N/A 0.071±0.00 0.279±0.00 0.095±0.00 0.437±0.07 N/A 0.042±0.00
ENSMUST00000138853 0.831±0.30 0.129±0.02 0.040±0.00 0.003±0.00 1.138±0.40 0.393±0.00 0.043±0.00 0.049±0.01 0.065±0.02 N/A 0.101±0.00 0.171±0.11 0.070±0.01 0.020±0.00
ENSMUSG00000082405 ENSMUST00000121176 N/A N/A N/A N/A N/A N/A N/A 0.704±0.00 N/A N/A N/A N/A N/A N/A

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