C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: slow myosin heavy chain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071433 smyhc2 7955 - 24:42264601-42285123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056849 smyhc2-001 42264601-42285123 protein_coding
  ENSDART00000124862 smyhc2-003 42280392-42285123 protein_coding
  ENSDART00000147211 smyhc2-002 42282614-42285123 retained_intron
  ENSDART00000149247 smyhc2-004 42278534-42280927 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000056849
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000056849 0.107±0.10 0.009±0.00 0.895±0.00 0.006±0.00 21.270±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z7 CIL_0004Z7_0002 CGP 24:42241037-42285123
CIL_0004Z7 CIL_0004Z7_0003 CGP 24:42264601-42310039

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016459 IEA myosin complex
GO:0031444 IGI slow-twitch skeletal muscle fiber contraction
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000092054 MYH7 myosin, heavy chain 7, cardiac muscle, beta protein_coding Homo_sapiens
ENSG00000197616 MYH6 myosin, heavy chain 6, cardiac muscle, alpha protein_coding Homo_sapiens
ENSMUSG00000040752 Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha protein_coding Mus_musculus
ENSMUSG00000053093 Myh7 myosin, heavy polypeptide 7, cardiac muscle, beta protein_coding Mus_musculus

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