C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, f, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076810 ptprfa 7955 + 6:2810030-3081396 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000026738 ptprfa-201 2810030-3081396 protein_coding
  ENSDART00000136261 ptprfa-002 3025300-3056407 processed_transcript
  ENSDART00000142544 ptprfa-001 2973878-3080584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000026738ENSDART00000136261ENSDART00000142544
Transcript ID Brain Heart Kidney Muscle
ENSDART00000026738 7.314±3.15 0.202±0.01 3.867±2.10 N/A
ENSDART00000136261 N/A 0.663±0.00 N/A N/A
ENSDART00000142544 8.416±3.36 0.152±0.00 N/A 0.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B6 CIL_0005B6_0001 CGP 6:2422955-3081396
CIL_0005B7 CIL_0005B7_0001 CGP 6:2810030-3126079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0097374 IGI sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142949 PTPRF protein tyrosine phosphatase, receptor type, F protein_coding Homo_sapiens
ENSMUSG00000033295 Ptprf protein tyrosine phosphatase, receptor type, F protein_coding Mus_musculus

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