C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005B6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030166-ENSDARG00000076810 CGP 7955 6:2422955-3081396
GeneTranscriptPositionBiotype
ENSDARG00000030166 (hyi)
hydroxypyruvate isomerase 		ENSDART00000044089 (hyi-201) 2422955-2429154 protein_coding
ENSDART00000155109 (hyi-001) 2426255-2429280 protein_coding
ENSDARG00000076810 (ptprfa)
protein tyrosine phosphatase, receptor type, f, a 		ENSDART00000026738 (ptprfa-201) 2810030-3081396 protein_coding
ENSDART00000136261 (ptprfa-002) 3025300-3056407 processed_transcript
ENSDART00000142544 (ptprfa-001) 2973878-3080584 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005B6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178922-ENSG00000142949 CGP 9606 1:43451003-43623666
GeneTranscriptPositionBiotype
ENSG00000142949 (PTPRF)
protein tyrosine phosphatase, receptor type, F 		ENST00000359947 (PTPRF-001) 43530876-43623666 protein_coding
ENST00000372405 (PTPRF-004) 43538198-43580078 processed_transcript
ENST00000372407 (PTPRF-005) 43598839-43623663 protein_coding
ENST00000412568 (PTPRF-014) 43591021-43622283 protein_coding
ENST00000414879 (PTPRF-006) 43591450-43622842 protein_coding
ENST00000429895 (PTPRF-015) 43591053-43623654 protein_coding
ENST00000436724 (PTPRF-003) 43530903-43580078 processed_transcript
ENST00000437607 (PTPRF-013) 43545076-43579284 protein_coding
ENST00000438120 (PTPRF-002) 43530890-43622357 protein_coding
ENST00000463041 (PTPRF-012) 43605582-43606868 processed_transcript
ENST00000467464 (PTPRF-011) 43582480-43591118 processed_transcript
ENST00000477970 (PTPRF-007) 43613140-43622863 processed_transcript
ENST00000481019 (PTPRF-010) 43528562-43553539 processed_transcript
ENST00000496043 (PTPRF-009) 43525187-43553519 processed_transcript
ENST00000496447 (PTPRF-008) 43598074-43623666 processed_transcript
ENST00000617451 (PTPRF-201) 43530876-43579285 protein_coding
ENSG00000178922 (HYI)
hydroxypyruvate isomerase (putative) 		ENST00000372425 (HYI-201) 43451003-43453989 protein_coding
ENST00000372427 (HYI-003) 43451160-43453909 retained_intron
ENST00000372430 (HYI-001) 43451158-43453675 protein_coding
ENST00000372432 (HYI-002) 43451158-43453963 protein_coding
ENST00000372433 (HYI-005) 43451154-43453716 protein_coding
ENST00000372434 (HYI-004) 43451154-43453825 protein_coding
ENST00000469587 (HYI-011) 43453161-43453808 retained_intron
ENST00000470662 (HYI-008) 43451158-43453452 protein_coding
ENST00000483618 (HYI-007) 43451153-43451740 retained_intron
ENST00000486909 (HYI-009) 43451320-43453848 protein_coding
ENST00000487366 (HYI-006) 43451158-43453467 protein_coding
ENST00000496142 (HYI-010) 43451667-43452219 retained_intron
ENST00000583037 (HYI-202) 43451003-43453989 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B6_0001ENSDARG00000030166ENSDART00000044089ENSDART00000155109ENSDARG00000076810ENSDART00000026738ENSDART00000136261ENSDART00000142544CIL_0005B6_0002ENSG00000142949ENST00000359947ENST00000372405ENST00000372407ENST00000412568ENST00000414879ENST00000429895ENST00000436724ENST00000437607ENST00000438120ENST00000463041ENST00000467464ENST00000477970ENST00000481019ENST00000496043ENST00000496447ENST00000617451ENSG00000178922ENST00000372425ENST00000372427ENST00000372430ENST00000372432ENST00000372433ENST00000372434ENST00000469587ENST00000470662ENST00000483618ENST00000486909ENST00000487366ENST00000496142ENST00000583037
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B6_0001ENSDARG00000030166ENSDART00000044089ENSDART00000155109ENSDARG00000076810ENSDART00000026738ENSDART00000136261ENSDART00000142544CIL_0005B6_0002ENSG00000142949ENST00000359947ENST00000372407ENST00000414879ENST00000429895ENST00000437607ENST00000438120ENST00000477970ENST00000496447ENST00000617451ENSG00000178922ENST00000372425ENST00000372427ENST00000372430ENST00000372432ENST00000372433ENST00000486909ENST00000487366ENST00000583037
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030166 ENSDART00000044089 N/A N/A N/A 6.094±1.56 N/A N/A 6.442±2.52 7.328±0.00 1.474±0.00 N/A 9.325±0.00 N/A N/A N/A
ENSDART00000155109 N/A N/A N/A 2.309±0.00 N/A N/A 3.767±0.00 N/A 3.411±0.00 N/A 7.084±0.00 N/A N/A N/A
ENSDARG00000076810 ENSDART00000026738 N/A N/A N/A 7.314±3.15 N/A N/A 0.202±0.01 3.867±2.10 N/A N/A N/A N/A N/A N/A
ENSDART00000136261 N/A N/A N/A N/A N/A N/A 0.663±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142544 N/A N/A N/A 8.416±3.36 N/A N/A 0.152±0.00 N/A N/A N/A 0.616±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142949 ENST00000359947 N/A 1.267±0.00 N/A 3.473±0.00 4.831±0.00 N/A N/A 9.117±0.00 10.955±0.00 5.798±4.11 0.470±0.00 N/A 6.213±0.00 N/A
ENST00000372405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372407 7.145±0.00 2.485±0.00 N/A 8.531±7.58 31.051±0.00 12.007±0.00 0.356±0.14 15.219±0.00 29.185±0.00 6.699±4.92 N/A 4.413±1.92 26.455±0.00 7.373±0.00
ENST00000412568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414879 7.820±0.00 N/A N/A 0.754±0.00 N/A N/A 0.107±0.00 N/A 1.524±0.00 N/A N/A 10.485±0.00 44.272±0.00 4.007±0.00
ENST00000429895 6.999±0.00 2.830±0.00 N/A N/A 28.855±0.00 7.066±0.00 0.378±0.00 6.806±0.00 14.154±0.00 9.698±0.00 0.254±0.00 11.977±10.44 20.782±4.73 4.437±2.30
ENST00000436724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437607 N/A N/A N/A N/A 12.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438120 N/A N/A 0.841±0.00 8.543±0.00 12.540±10.48 8.196±0.00 0.089±0.00 6.434±0.00 2.180±0.00 N/A 0.189±0.00 1.484±0.00 12.412±4.03 2.313±0.87
ENST00000463041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.00 N/A N/A N/A
ENST00000481019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496447 N/A 1.342±0.00 N/A N/A 2.794±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.025±0.00
ENST00000617451 N/A N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A 1.842±0.00 N/A N/A N/A
ENSG00000178922 ENST00000372425 N/A N/A N/A N/A N/A N/A N/A 7.990±0.00 N/A N/A N/A N/A N/A N/A
ENST00000372427 N/A N/A N/A 8.103±0.00 9.564±0.00 3.542±0.00 N/A 9.757±0.00 N/A 5.579±0.00 N/A 9.508±5.17 N/A N/A
ENST00000372430 N/A N/A N/A N/A 27.379±0.00 17.673±0.00 N/A N/A N/A N/A N/A 39.081±0.00 24.320±11.59 N/A
ENST00000372432 N/A N/A N/A N/A N/A N/A N/A 4.591±0.00 N/A 17.313±0.00 N/A N/A 9.009±0.00 N/A
ENST00000372433 N/A N/A N/A N/A N/A N/A N/A N/A 17.737±0.00 N/A N/A N/A 9.646±0.00 N/A
ENST00000372434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486909 N/A N/A N/A N/A 7.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.429±0.00 N/A
ENST00000496142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.184±0.00 N/A

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