C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000026738 ptprfa-201 ENSDARG00000076810 7955 + 6:2810030-3081396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000026738
Transcript ID Brain Heart Kidney
ENSDART00000026738 7.314±3.15 0.202±0.01 3.867±2.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B6 CIL_0005B6_0001 CGP 6:2422955-3081396
CIL_0005B7 CIL_0005B7_0001 CGP 6:2810030-3126079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0097374 IGI sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067538 Ptprs-001 protein_coding Mus_musculus 0 1090
ENSMUST00000086828 Ptprs-002 protein_coding Mus_musculus 0 1090
ENST00000359947 PTPRF-001 protein_coding Homo_sapiens 0 1507
ENST00000372407 PTPRF-005 protein_coding Homo_sapiens 0 1397
ENST00000412568 PTPRF-014 protein_coding Homo_sapiens 0 1397
ENST00000414879 PTPRF-006 protein_coding Homo_sapiens 0 1397
ENST00000429895 PTPRF-015 protein_coding Homo_sapiens 0 1507
ENST00000438120 PTPRF-002 protein_coding Homo_sapiens 0 1507
ENST00000477970 PTPRF-007 processed_transcript Homo_sapiens 0 1011
ENST00000496447 PTPRF-008 processed_transcript Homo_sapiens 0 1507

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