C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tachykinin, precursor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006128 TAC1 9606 + 7:97731908-97740472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319273 TAC1-001 97731908-97740472 protein_coding
  ENST00000346867 TAC1-002 97732084-97740465 protein_coding
  ENST00000350485 TAC1-003 97732084-97740438 protein_coding
  ENST00000491437 TAC1-005 97733954-97740063 retained_intron
  ENST00000495916 TAC1-004 97732161-97733090 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000319273ENST00000346867ENST00000350485ENST00000491437ENST00000495916
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000319273 N/A N/A 1.889±0.51 0.480±0.00 0.631±0.00 N/A 0.104±0.00 N/A 0.052±0.00 N/A N/A N/A
ENST00000346867 N/A 0.100±0.00 0.884±0.02 N/A 1.846±0.00 0.152±0.00 N/A N/A N/A 0.070±0.00 N/A 0.304±0.16
ENST00000350485 N/A N/A 2.113±0.00 0.148±0.00 1.647±0.80 0.174±0.00 0.132±0.00 0.018±0.00 0.180±0.00 0.069±0.05 N/A N/A
ENST00000491437 0.040±0.00 N/A N/A 0.130±0.00 N/A 0.214±0.00 N/A N/A N/A 0.040±0.03 N/A 0.538±0.00
ENST00000495916 0.229±0.00 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BH CIL_0003BH_0002 CGP 7:97116590-97740472
CIL_0005L4 CIL_0005L4_0002 CGP 7:97731908-97872542

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002675 IEA positive regulation of acute inflammatory response
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0005886 IEA plasma membrane
GO:0006954 IEA inflammatory response
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0007217 IEA tachykinin receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007268 IEA synaptic transmission
GO:0007320 TAS insemination
GO:0007616 IEA long-term memory
GO:0008217 IEA regulation of blood pressure
GO:0008306 IEA associative learning
GO:0009582 TAS detection of abiotic stimulus
GO:0009725 IEA response to hormone
GO:0010459 IEA negative regulation of heart rate
GO:0010634 IEA positive regulation of epithelial cell migration
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0031835 IEA substance P receptor binding
GO:0032224 IEA positive regulation of synaptic transmission, cholinergic
GO:0032230 IEA positive regulation of synaptic transmission, GABAergic
GO:0032496 IEA response to lipopolysaccharide
GO:0035815 IEA positive regulation of renal sodium excretion
GO:0043025 IEA neuronal cell body
GO:0043278 IEA response to morphine
GO:0045760 IEA positive regulation of action potential
GO:0045778 IEA positive regulation of ossification
GO:0046878 IEA positive regulation of saliva secretion
GO:0048265 IEA response to pain
GO:0050671 IEA positive regulation of lymphocyte proliferation
GO:0051496 IEA positive regulation of stress fiber assembly
GO:2000854 IEA positive regulation of corticosterone secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014490 tac1 tachykinin 1 protein_coding Danio_rerio
ENSMUSG00000061762 Tac1 tachykinin 1 protein_coding Mus_musculus

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