C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tachykinin, precursor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346867 TAC1-002 ENSG00000006128 9606 + 7:97732084-97740465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartOvaryTestisENST00000346867
Transcript ID Adrenal Brain Colon Heart Ovary Testis
ENST00000346867 0.100±0.00 0.884±0.02 1.846±0.00 0.152±0.00 0.070±0.00 0.304±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BH CIL_0003BH_0002 CGP 7:97116590-97740472
CIL_0005L4 CIL_0005L4_0002 CGP 7:97731908-97872542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0007217 IEA tachykinin receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007268 IEA synaptic transmission
GO:0007320 TAS insemination
GO:0009582 TAS detection of abiotic stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184986 Tac1-002 protein_coding Mus_musculus 0 625
ENSMUST00000090679 Tac1-004 protein_coding Mus_musculus 0 520
ENSMUST00000185187 Tac1-001 protein_coding Mus_musculus 0 429
ENSMUST00000185130 Tac1-005 protein_coding Mus_musculus 0 231

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